RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 LOC110117498-PIK3R3F6TDL0 507 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 SERPINA3P01011 423 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 ROR2Q01974 943 aaKnown RBP16.86■□□□□ 0.29
CHRD-208ENST00000460627 TRIM73Q86UV7 250 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 ZBTB46Q86UZ6 589 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 IL22RA1Q8N6P7 574 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 OR6C4Q8NGE1 309 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 TRNT1Q96Q11 434 aaKnown RBP16.86■□□□□ 0.29
CHRD-208ENST00000460627 LPAR4Q99677 370 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 COQ7Q99807 217 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 DUSP23Q9BVJ7 150 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 OR1E2P47887 323 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 PLCXD2Q0VAA5 305 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 CRTC2Q53ET0 693 aaPredicted RBP16.86■□□□□ 0.29
CHRD-208ENST00000460627 PERM1Q5SV97 790 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 CLECL1Q8IZS7 167 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 OR5M3Q8NGP4 307 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 NAT6Q93015 286 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 CPNE7Q9UBL6 633 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 ADAMTS6Q9UKP5 1117 aa16.86■□□□□ 0.29
CHRD-208ENST00000460627 ZFR2Q9UPR6 939 aaKnown RBP16.86■□□□□ 0.29
CHRD-208ENST00000460627 EFCAB9A8MZ26 197 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 CAPN3P20807 821 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 CLCN2P51788 898 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 FOXA1P55317 472 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 ADAMTSL4Q6UY14 1074 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 ZNF551Q7Z340 670 aaPredicted RBP16.85■□□□□ 0.29
CHRD-208ENST00000460627 PEX11GQ96HA9 241 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 SH3YL1Q96HL8 342 aaPredicted RBP16.85■□□□□ 0.29
CHRD-208ENST00000460627 UHRF1Q96T88 793 aaPredicted RBP16.85■□□□□ 0.29
CHRD-208ENST00000460627 TBC1D17Q9HA65 648 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 PALMDQ9NP74 551 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 MRPL39Q9NYK5 338 aaKnown RBP16.85■□□□□ 0.29
CHRD-208ENST00000460627 FAAHO00519 579 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 CD47Q08722 323 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 CCINQ13939 588 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 TMEM52BQ4KMG9 183 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 IER5LQ5T953 404 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 RNF220Q5VTB9 566 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 LCN8Q6JVE9 175 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 PROKR2Q8NFJ6 384 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 OR52P1PQ8NH57 321 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 RNASE11Q8TAA1 199 aaKnown RBP16.85■□□□□ 0.29
CHRD-208ENST00000460627 GNPDA2Q8TDQ7 276 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 ECHDC3Q96DC8 303 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 PIP5K1AQ99755 562 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 UBE2QL1A1L167 161 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 HCRTR2O43614 444 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 PLGP00747 810 aaPredicted RBP16.85■□□□□ 0.29
CHRD-208ENST00000460627 C7P10643 843 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 PRKAR1AP10644 381 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 FAUP35544 74 aaKnown RBP16.85■□□□□ 0.29
CHRD-208ENST00000460627 QPRTQ15274 297 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 FKBP10Q96AY3 582 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 MAGIXQ9H6Y5 334 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 BTNL2Q9UIR0 455 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 COL4A1P02462 1669 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 PRKACGP22612 351 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 PRDX3P30048 256 aaKnown RBP16.85■□□□□ 0.29
CHRD-208ENST00000460627 PRDX1Q06830 199 aaKnown RBP16.85■□□□□ 0.29
CHRD-208ENST00000460627 FAM131AQ6UXB0 335 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 ZSWIM3Q96MP5 696 aa16.85■□□□□ 0.29
CHRD-208ENST00000460627 NPIPA5E9PKD4 350 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 SDC1P18827 310 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 RORAP35398 523 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 CDH11P55287 796 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 RPS15P62841 145 aaKnown RBP16.84■□□□□ 0.29
CHRD-208ENST00000460627 TIGD6Q17RP2 521 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 TPRG1LQ5T0D9 272 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 LARP4Q71RC2 724 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHRD-208ENST00000460627 CLEC14AQ86T13 490 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 ZNF440Q8IYI8 595 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 GFM1Q96RP9 751 aaKnown RBP16.84■□□□□ 0.29
CHRD-208ENST00000460627 CFHR5Q9BXR6 569 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 PBX4Q9BYU1 374 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 TRIM8Q9BZR9 551 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 TOR3AQ9H497 397 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 NPIPA1Q9UND3 350 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 DPPA5A6NC42 116 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 DEFB110Q30KQ9 67 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 CYP4V2Q6ZWL3 525 aaPredicted RBP16.84■□□□□ 0.29
CHRD-208ENST00000460627 PDSS2Q86YH6 399 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 PNPLA2Q96AD5 504 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 ACSL6Q9UKU0 697 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 CCDC182A6NF36 153 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 PPM1BO75688 479 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 ETFAP13804 333 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 HOXC8P31273 242 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 DEFB133Q30KQ1 61 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 DDI2Q5TDH0 399 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 C1orf53Q5VUE5 145 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 PAMR1Q6UXH9 720 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 HSDL2Q6YN16 418 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 OR4N5Q8IXE1 308 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 NEK7Q8TDX7 302 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 PRR11Q96HE9 360 aaPredicted RBP16.84■□□□□ 0.29
CHRD-208ENST00000460627 TRNAU1APQ9NX07 287 aaKnown RBP16.84■□□□□ 0.29
CHRD-208ENST00000460627 TAS2R7Q9NYW3 318 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 SRPK3Q9UPE1 567 aa16.84■□□□□ 0.29
CHRD-208ENST00000460627 LRRC42Q9Y546 428 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms