RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
SYPL1-202ENST00000455385 WDR41Q9HAD4 459 aa10.09□□□□□ -0.79
SYPL1-202ENST00000455385 SLC52A3Q9NQ40 469 aa10.09□□□□□ -0.79
SYPL1-202ENST00000455385 EHD3Q9NZN3 535 aa10.09□□□□□ -0.79
SYPL1-202ENST00000455385 ZIM2Q9NZV7 527 aa10.09□□□□□ -0.79
SYPL1-202ENST00000455385 CCDC167Q9P0B6 97 aa10.09□□□□□ -0.79
SYPL1-202ENST00000455385 SH3BP4Q9P0V3 963 aa10.09□□□□□ -0.79
SYPL1-202ENST00000455385 IL17BQ9UHF5 180 aa10.09□□□□□ -0.79
SYPL1-202ENST00000455385 UTS2RQ9UKP6 389 aa10.09□□□□□ -0.79
SYPL1-202ENST00000455385 FARSAQ9Y285 508 aaKnown RBP10.09□□□□□ -0.79
SYPL1-202ENST00000455385 IDSB3KWA1 339 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 CLDN4O14493 209 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 ERAL1O75616 437 aaKnown RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 CAPNS1P04632 268 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 RAB40ALP0C0E4 278 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 LIPCP11150 499 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 EFNA1P20827 205 aaPredicted RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 DLSTP36957 453 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 WNT3P56703 355 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 HSD17B7P56937 341 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 ACTN3Q08043 901 aaPredicted RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 SLC13A2Q13183 592 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 SRSF6Q13247 344 aaKnown RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 DNASE1L3Q13609 305 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 AGKQ53H12 422 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 SPANXN4Q5MJ08 99 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 MFSD4BQ5TF39 518 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 OR52E8Q6IFG1 317 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 IL22RA1Q8N6P7 574 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 AMER2Q8N7J2 671 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 PLPP5Q8NEB5 264 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 GATA6Q92908 595 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 FGF11Q92914 225 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 CIDECQ96AQ7 238 aaPredicted RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 TESCQ96BS2 214 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 PPCDCQ96CD2 204 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 CNRIP1Q96F85 164 aaPredicted RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 CCDC106Q9BWC9 280 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 SLAMF7Q9NQ25 335 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 MIEF1Q9NQG6 463 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 C14orf105Q9NVL8 296 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 TCFL5Q9UL49 500 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 ERVK-11Q9UQG0 969 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 PTRH2Q9Y3E5 179 aaKnown RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 MRPS18BQ9Y676 258 aaKnown RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 APC2O95996 2303 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 NUP210LQ5VU65 1888 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 IGKV3D-11A0A0A0MRZ8 115 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 TBX19O60806 448 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 CCDC22O60826 627 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 SCN2BO60939 215 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 GPR75O95800 540 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 COX7A2P14406 83 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 PTPN4P29074 926 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 PPP2R1BP30154 601 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 PTGER1P34995 402 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 FEN1P39748 380 aaKnown RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 XKP51811 444 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 POLR2JP52435 117 aaKnown RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 EMP2P54851 167 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 STX1BP61266 288 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 KLF10Q13118 480 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 CLN3Q13286 438 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 PGS1Q32NB8 556 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 FAM174BQ3ZCQ3 159 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 FAAH2Q6GMR7 532 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 BLOC1S3Q6QNY0 202 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 QSOX2Q6ZRP7 698 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 CAMKMTQ7Z624 323 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 TREML1Q86YW5 311 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 FAM9CQ8IZT9 166 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 OR4K14Q8NGD5 310 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 OR2Y1Q8NGV0 311 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 KLHL29Q96CT2 875 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 MTERF3Q96E29 417 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 NAF1Q96HR8 494 aaKnown RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 ALOXE3Q9BYJ1 711 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 SLC35C2Q9NQQ7 365 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 PRDM9Q9NQV7 894 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 C3orf18Q9UK00 162 aa10.08□□□□□ -0.8
SYPL1-202ENST00000455385 MRPS33Q9Y291 106 aaKnown RBP10.08□□□□□ -0.8
SYPL1-202ENST00000455385 C21orf140B9A014 251 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 HEXBP07686 556 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 PCSK2P16519 638 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 HPCAL1P37235 193 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 PCBP4P57723 403 aaKnown RBP10.07□□□□□ -0.8
SYPL1-202ENST00000455385 RPS15P62841 145 aaKnown RBP10.07□□□□□ -0.8
SYPL1-202ENST00000455385 IGLV3-21P80748 117 aaPredicted RBP10.07□□□□□ -0.8
SYPL1-202ENST00000455385 NSDHLQ15738 373 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 CPTPQ5TA50 214 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 OR4F3Q6IEY1 312 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 DGAT2L6Q6ZPD8 337 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 GK5Q6ZS86 529 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 LANCL3Q6ZV70 420 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 R3HCC1LQ7Z5L2 792 aaKnown RBP10.07□□□□□ -0.8
SYPL1-202ENST00000455385 VASH2Q86V25 355 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 CCDC116Q8IYX3 515 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 FITM2Q8N6M3 262 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 SUN3Q8TAQ9 357 aa10.07□□□□□ -0.8
SYPL1-202ENST00000455385 VPS33AQ96AX1 596 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms