RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 Q6ZSR6 202 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 GALNT12Q8IXK2 581 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 NAGSQ8N159 534 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 ANKFN1Q8N957 763 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 TMEM19Q96HH6 336 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 LIN28AQ9H9Z2 209 aaKnown RBP9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 LMAN1LQ9HAT1 526 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 PELI2Q9HAT8 420 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 DMRT3Q9NQL9 472 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 SMOXQ9NWM0 555 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 NKIRAS2Q9NYR9 191 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 TMEM181Q9P2C4 612 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 CLEC4EQ9ULY5 219 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 IFT52Q9Y366 437 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 PAPPA2Q9BXP8 1791 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 ANHXE9PGG2 379 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 MAGEB3O15480 346 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 AKAP8O43823 692 aaKnown RBP9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 GPR37L1O60883 481 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 PSIP1O75475 530 aaKnown RBP9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 C1orf105O95561 183 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 RENP00797 406 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 IGLV3-27P01718 113 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 CD2P06729 351 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 PIM1P11309 404 aaPredicted RBP9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 PSMD7P51665 324 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 TAS2R38P59533 333 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 CDKL1Q00532 357 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 IRF4Q15306 451 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 LCTLQ6UWM7 567 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 MCEMP1Q8IX19 187 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 KLHL36Q8N4N3 616 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 TMEM156Q8N614 296 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 OR5M3Q8NGP4 307 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 HDAC2Q92769 488 aaKnown RBP9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 ECHDC3Q96DC8 303 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 TRNT1Q96Q11 434 aaKnown RBP9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 FEVQ99581 238 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 NLGN3Q9NZ94 848 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 PRODH2Q9UF12 536 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 DNMT3AQ9Y6K1 912 aaPredicted RBP9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 TUBGCP6Q96RT7 1819 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 COL4A5P29400 1685 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 ADAMTSL1Q8N6G6 1762 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 ARNTLO00327 626 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 SDC3O75056 442 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 BMP2P12643 396 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 PORP16435 677 aaPredicted RBP9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 FCHO2Q0JRZ9 810 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 EXOC3L2Q2M3D2 409 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 DEFB110Q30KQ9 67 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 INAVAQ3KP66 663 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 SBSNQ6UWP8 590 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 ATG14Q6ZNE5 492 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 ATCAYQ86WG3 371 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 SUN3Q8TAQ9 357 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 RLN3Q8WXF3 142 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 NR4A3Q92570 626 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 ARRDC3Q96B67 414 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 CRELD1Q96HD1 420 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 EPYCQ99645 322 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 ZFYVE21Q9BQ24 234 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 MCOLN1Q9GZU1 580 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 TMEM138Q9NPI0 162 aa9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.59□□□□□ -0.87
CSGALNACT1-203ENST00000454498 A0A1W2PPW3 197 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 I6L893 689 aaPredicted RBP9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 SOCS2O14508 198 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 SNPHO15079 494 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 RETP07949 1114 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 MMP2P08253 660 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 SHC2P98077 582 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 MC1RQ01726 317 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 PON3Q15166 354 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 RNASE12Q5GAN4 147 aaKnown RBP9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 ZCCHC12Q6PEW1 402 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 ARL9Q6T311 187 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 UTS2BQ765I0 119 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 NANOGNBQ7Z5D8 188 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 LMNTD1Q8N9Z9 388 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 OLIG1Q8TAK6 271 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 CNIH3Q8TBE1 160 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 ISL2Q96A47 359 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 RNF31Q96EP0 1072 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 BIRC8Q96P09 236 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 GPER1Q99527 375 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 KCNS3Q9BQ31 491 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 ANKRA2Q9H9E1 313 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 PAK6Q9NQU5 681 aaPredicted RBP9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 SERINC1Q9NRX5 453 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 SPATA6Q9NWH7 488 aaPredicted RBP9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 COMMD3Q9UBI1 195 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 SUSD2Q9UGT4 822 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 MKLN1Q9UL63 735 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 TRIOBPQ9H2D6 2365 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 GRXCR2A6NFK2 248 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 GPR89AB7ZAQ6 455 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 WWP2O00308 870 aa9.58□□□□□ -0.88
CSGALNACT1-203ENST00000454498 LSM1O15116 133 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms