RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CHST11Q9NPF2 352 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 LAMA3Q16787 3333 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 CCDC162PA2VCL2 907 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 E9PAM4 449 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 WNT9AO14904 365 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 SPINT1O43278 529 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 EDF1O60869 148 aaKnown RBP7.42□□□□□ -1.22
BRCC3-208ENST00000453705 CFIP05156 583 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 CCL2P13500 99 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 CCNB1P14635 433 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 CPA3P15088 417 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 ZNF26P17031 533 aaPredicted RBP7.42□□□□□ -1.22
BRCC3-208ENST00000453705 SLCO1A2P46721 670 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 STK19P49842 368 aaPredicted RBP7.42□□□□□ -1.22
BRCC3-208ENST00000453705 USP41Q3LFD5 358 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 CATSPEREQ5SY80 951 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 KYAT3Q6YP21 454 aaKnown RBP7.42□□□□□ -1.22
BRCC3-208ENST00000453705 EIF3MQ7L2H7 374 aaKnown RBP7.42□□□□□ -1.22
BRCC3-208ENST00000453705 GPR180Q86V85 440 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 ABI1Q8IZP0 508 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 SLC39A11Q8N1S5 342 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 CYB561A3Q8NBI2 242 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 FAM110DQ8TAY7 271 aaPredicted RBP7.42□□□□□ -1.22
BRCC3-208ENST00000453705 PAQR8Q8TEZ7 354 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 FIG4Q92562 907 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 MRGPRFQ96AM1 343 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 LGMNQ99538 433 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 GRIP2Q9C0E4 1043 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 C10orf88Q9H8K7 445 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 ZFYVE1Q9HBF4 777 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 TSC22D4Q9Y3Q8 395 aa7.42□□□□□ -1.22
BRCC3-208ENST00000453705 TMEM184BQ9Y519 407 aaPredicted RBP7.42□□□□□ -1.22
BRCC3-208ENST00000453705 TRAV25A0A0B4J276 109 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 OOEPA6NGQ2 149 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 FBLL1A6NHQ2 334 aaKnown RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ZNF785A8K8V0 405 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 I3L4J1 428 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 SLC22A2O15244 555 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 SERPINI2O75830 405 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 NSA2O95478 260 aaKnown RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 TIMP1P01033 207 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 APRTP07741 180 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 CTSBP07858 339 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ITGA2P17301 1181 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 PSMB4P28070 264 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 THBS2P35442 1172 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 BNC1Q01954 994 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 IL10RBQ08334 325 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 CDH17Q12864 832 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 NR1D2Q14995 579 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 C1orf210Q8IVY1 113 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 AQP12AQ8IXF9 295 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 TMEM199Q8N511 208 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 CPEB3Q8NE35 698 aaKnown RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 CADM4Q8NFZ8 388 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 MIB2Q96AX9 1013 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 KLHL29Q96CT2 875 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 IGSF21Q96ID5 467 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 MRGPRX4Q96LA9 322 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ZSWIM3Q96MP5 696 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 POLDIP3Q9BY77 421 aaKnown RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ZYG11BQ9C0D3 744 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 CTDSP1Q9GZU7 261 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 SLC25A51Q9H1U9 297 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ENTPD7Q9NQZ7 604 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 CNOT2Q9NZN8 540 aaKnown RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ARL2BPQ9Y2Y0 163 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ZCWPW2A0A1B0GU75 182 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 MARCH11A6NNE9 402 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 SLC38A8A6NNN8 435 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ANKRD66B4E2M5 251 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ZNF701M0R085 212 aaPredicted RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 MAN2B1O00754 1011 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 EPOP01588 193 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 GNAO1P09471 354 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 RNF224P0DH78 156 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 CREB1P16220 341 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 MALP21145 153 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 EPHB2P29323 1055 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 FOXN2P32314 431 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 CSF2RBP32927 897 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 KIR3DL2P43630 455 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 GSTM5P46439 218 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 FAM3BP58499 235 aaPredicted RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 ACVR1Q04771 509 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 KPNB1Q14974 876 aaKnown RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 AP5B1Q2VPB7 878 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 MS4A13Q5J8X5 152 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 WASHC2DQ5SRD0 308 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 LIPNQ5VXI9 398 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 LIPMQ5VYY2 423 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 IL20RBQ6UXL0 311 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 COMMD1Q8N668 190 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 GRHL3Q8TE85 626 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 RAB1CQ92928 201 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 LINGO1Q96FE5 620 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 BSCL2Q96G97 398 aaPredicted RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 AKIRIN1Q9H9L7 192 aaPredicted RBP7.41□□□□□ -1.22
BRCC3-208ENST00000453705 MAN2C1Q9NTJ4 1040 aa7.41□□□□□ -1.22
BRCC3-208ENST00000453705 GFOD1Q9NXC2 390 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms