RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PRMT3O60678 531 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 ALOX12BO75342 701 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 IL3P08700 152 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 BCKDHAP12694 445 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 SDC1P18827 310 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 MMP11P24347 488 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 TACR1P25103 407 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 BUD31P41223 144 aaPredicted RBP12.24□□□□□ -0.45
VPS33A-202ENST00000451053 TAS2R50P59544 299 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 TRA2BP62995 288 aaKnown RBP12.24□□□□□ -0.45
VPS33A-202ENST00000451053 ZNF763Q0D2J5 394 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 CDC20Q12834 499 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 UGT8Q16880 541 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 PDCD4Q53EL6 469 aaKnown RBP12.24□□□□□ -0.45
VPS33A-202ENST00000451053 TMEM198Q66K66 360 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 QSOX2Q6ZRP7 698 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 MRGPREQ86SM8 312 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 ZNF595Q8IYB9 648 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 PLPP5Q8NEB5 264 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 CDC26Q8NHZ8 85 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 C8orf44Q96CB5 159 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 PTCHD1Q96NR3 888 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 TUBB6Q9BUF5 446 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 BRINP2Q9C0B6 783 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 ZNF385DQ9H6B1 395 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 RPF2Q9H7B2 306 aaKnown RBP12.24□□□□□ -0.45
VPS33A-202ENST00000451053 NECTIN3Q9NQS3 549 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 PRDM9Q9NQV7 894 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 MRPS33Q9Y291 106 aaKnown RBP12.24□□□□□ -0.45
VPS33A-202ENST00000451053 MMACHCQ9Y4U1 282 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 HS3ST3B1Q9Y662 390 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 SCN2AQ99250 2005 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 FRYQ5TBA9 3013 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 CLDN4O14493 209 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 SOCS6O14544 535 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 FGF17O60258 216 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 LDB3O75112 727 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 GUCY1B2O75343 617 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 IGHEP01854 428 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 ALDOCP09972 364 aaKnown RBP12.23□□□□□ -0.45
VPS33A-202ENST00000451053 C8orf89P0DMQ9 161 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 TLX1P31314 330 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-202ENST00000451053 GSTM5P46439 218 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 ASMTP46597 345 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 HSD17B7P56937 341 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 TMPRSS3P57727 454 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 MC1RQ01726 317 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 ID2Q02363 134 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 SLC13A2Q13183 592 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 ATP1A4Q13733 1029 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 MAPRE2Q15555 327 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 NSDHLQ15738 373 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 IL23RQ5VWK5 629 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 OR52E8Q6IFG1 317 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 TMEM205Q6UW68 189 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 C6orf89Q6UWU4 347 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 ANKRD37Q7Z713 158 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 RAB43Q86YS6 212 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 OR4N5Q8IXE1 308 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 FITM2Q8N6M3 262 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 CLHC1Q8NHS4 586 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.23□□□□□ -0.45
VPS33A-202ENST00000451053 ANKRD9Q96BM1 317 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-202ENST00000451053 EGLN2Q96KS0 407 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 TSSK3Q96PN8 268 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 ZBTB18Q99592 522 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 WDR41Q9HAD4 459 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 MYNNQ9NPC7 610 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 SDR39U1Q9NRG7 319 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-202ENST00000451053 ZIM2Q9NZV7 527 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 C5AR2Q9P296 337 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 BAIAP2L1Q9UHR4 511 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 G3BP2Q9UN86 482 aaKnown RBP12.23□□□□□ -0.45
VPS33A-202ENST00000451053 WBP11Q9Y2W2 641 aaKnown RBP12.23□□□□□ -0.45
VPS33A-202ENST00000451053 PCDHA9Q9Y5H5 950 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 GPR45Q9Y5Y3 372 aa12.23□□□□□ -0.45
VPS33A-202ENST00000451053 COPG1Q9Y678 874 aaKnown RBP12.23□□□□□ -0.45
VPS33A-202ENST00000451053 IGF2RP11717 2491 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 URB1O60287 2271 aaKnown RBP12.22□□□□□ -0.45
VPS33A-202ENST00000451053 IGHV3-20A0A0C4DH32 117 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 A0A1W2PS29 197 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 TCRBV16S1A1N1A0A5B0 115 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 C1orf226A1L170 272 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 BLACEA4D250 179 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 K7ENP7 123 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 MASP2O00187 686 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 CTNSO60931 367 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 CYC1P08574 325 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 PRDX6P30041 224 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 PPP2R1BP30154 601 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 ALDH9A1P49189 494 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 UCNP55089 124 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 FOLH1Q04609 750 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 EEF1A2Q05639 463 aaKnown RBP12.22□□□□□ -0.45
VPS33A-202ENST00000451053 KLF10Q13118 480 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 UBAP2LQ14157 1087 aaKnown RBP12.22□□□□□ -0.45
VPS33A-202ENST00000451053 KRT72Q14CN4 511 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 ZSCAN26Q16670 478 aa12.22□□□□□ -0.45
VPS33A-202ENST00000451053 CRTC2Q53ET0 693 aaPredicted RBP12.22□□□□□ -0.45
VPS33A-202ENST00000451053 FAM71E1Q6IPT2 247 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms