RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SPACA6W5XKT8 324 aa12.47□□□□□ -0.41
CPSF4-206ENST00000441580 A0A087WXM4 84 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 A0A1W2PR48 441 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 A0A1W2PR77 199 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 KRBA1A5PL33 1030 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 LILRA5A6NI73 299 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 FAM170BA6NMN3 283 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 B4DGG1 531 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 PLOD2O00469 737 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 PPM1DO15297 605 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 DNAJB5O75953 348 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 STATHP02808 62 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 CSF2P04141 144 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 BCHEP06276 602 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 FHP07954 510 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 GNAO1P09471 354 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 IL9P15248 144 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 CD38P28907 300 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 IST1P53990 364 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 RAB8AP61006 207 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 KCNC4Q03721 635 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 SIM2Q14190 667 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-206ENST00000441580 PRAMEF8Q5VWM4 474 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 PRAMEF7Q5VXH5 474 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 FCRL6Q6DN72 434 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 TNFAIP8L2Q6P589 184 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-206ENST00000441580 C6orf120Q7Z4R8 191 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 SDR16C5Q8N3Y7 309 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 HORMAD2Q8N7B1 307 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 AMER3Q8N944 861 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 SETD9Q8NE22 299 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 BBS10Q8TAM1 723 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 SPPL2AQ8TCT8 520 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 MIPOL1Q8TD10 442 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 C7orf34Q96L11 122 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 ZNF607Q96SK3 696 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 MBOAT4Q96T53 435 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 ING2Q9H160 280 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 RUBCNLQ9H714 662 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 LYRM4Q9HD34 91 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 VNN3Q9NY84 501 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 FBXW2Q9UKT8 454 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 BLOC1S6Q9UL45 172 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 KLHL20Q9Y2M5 609 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 ATG4BQ9Y4P1 393 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 ZNF780BQ9Y6R6 833 aa12.46□□□□□ -0.41
CPSF4-206ENST00000441580 TRBV23OR9-2A0A075B6M9 112 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 A0A0J9YVX5 310 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 TRIM64A6NGJ6 449 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 SOX1O00570 391 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-206ENST00000441580 P2RX6O15547 441 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 PROM1O43490 865 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 ASNA1O43681 348 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 CTSVO60911 334 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 GCM2O75603 506 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-206ENST00000441580 SLITRK5O94991 958 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 BMP10O95393 424 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 OPN1SWP03999 348 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 IFNW1P05000 195 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 CELA2BP08218 269 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-206ENST00000441580 IFI6P09912 130 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 SMIM10L1P0DMW3 83 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 CPN2P22792 545 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 TLX1P31314 330 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-206ENST00000441580 MPIP34949 423 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 FASLGP48023 281 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 SKP1P63208 163 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 BTN3A2P78410 334 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 FZD5Q13467 585 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 SZRD1Q7Z422 152 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 THAP5Q7Z6K1 395 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 KRT73Q86Y46 540 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 OFCC1Q8IZS5 231 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 OR10Q1Q8NGQ4 319 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 ZCCHC10Q8TBK6 192 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 PATE1Q8WXA2 126 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 RLN3Q8WXF3 142 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 SMIM10Q96HG1 83 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 TMEM19Q96HH6 336 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 CDX2Q99626 313 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-206ENST00000441580 CCDC3Q9BQI4 270 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-206ENST00000441580 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-206ENST00000441580 FOXQ1Q9C009 403 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 TBC1D17Q9HA65 648 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 C3orf14Q9HBI5 128 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 EXD2Q9NVH0 621 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 DDX18Q9NVP1 670 aaKnown RBP12.45□□□□□ -0.42
CPSF4-206ENST00000441580 C2orf42Q9NWW7 574 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 HRASLS2Q9NWW9 162 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 THEGQ9P2T0 379 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 CES1P1Q9UKY3 287 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 COLQQ9Y215 455 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-206ENST00000441580 PCDHGB5Q9Y5G0 923 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 PCDHGB3Q9Y5G1 929 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 MDC1Q14676 2089 aaKnown RBP12.45□□□□□ -0.42
CPSF4-206ENST00000441580 MYO10Q9HD67 2058 aa12.45□□□□□ -0.42
CPSF4-206ENST00000441580 ARRDC5A6NEK1 342 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 TRIM64CA6NLI5 447 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 A8MVJ9 347 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms