RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 GGT1P19440 569 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 NT5EP21589 574 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 HRH2P25021 359 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 HOXA11P31270 313 aaPredicted RBP6.12□□□□□ -1.43
BDNF-211ENST00000439476 CAP1Q01518 475 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 C19orf57Q0VDD7 668 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 ST3GAL3Q11203 375 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 CYBRD1Q53TN4 286 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 CRB2Q5IJ48 1285 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 ADGRF1Q5T601 910 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 ZNF517Q6ZMY9 492 aaPredicted RBP6.12□□□□□ -1.43
BDNF-211ENST00000439476 SLC9B2Q86UD5 537 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 CNTN4Q8IWV2 1026 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 HS3ST5Q8IZT8 346 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 ZNF433Q8N7K0 673 aaPredicted RBP6.12□□□□□ -1.43
BDNF-211ENST00000439476 ZNF548Q8NEK5 533 aaPredicted RBP6.12□□□□□ -1.43
BDNF-211ENST00000439476 OR52B6Q8NGF0 335 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 CEP76Q8TAP6 659 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 ZFP90Q8TF47 636 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 RAB7BQ96AH8 199 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 EXOSC8Q96B26 276 aaKnown RBP6.12□□□□□ -1.43
BDNF-211ENST00000439476 BRINP2Q9C0B6 783 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 PLEKHA1Q9HB21 404 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 NMUR1Q9HB89 426 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 IFT46Q9NQC8 304 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 ZNF639Q9UID6 485 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 ENPP5Q9UJA9 477 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 SLC19A2O60779 497 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 SCGB1D2O95969 90 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 CRHBPP24387 322 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 FNTBP49356 437 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 DSG2Q14126 1118 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 LRIT3Q3SXY7 679 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 KCTD11Q693B1 232 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 TMCO2Q7Z6W1 182 aaPredicted RBP6.12□□□□□ -1.43
BDNF-211ENST00000439476 COX18Q8N8Q8 333 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 SMPDL3AQ92484 453 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 NUDT16L1Q9BRJ7 211 aaKnown RBP6.12□□□□□ -1.43
BDNF-211ENST00000439476 UCK2Q9BZX2 261 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 GPN2Q9H9Y4 310 aaPredicted RBP6.12□□□□□ -1.43
BDNF-211ENST00000439476 NKIRAS2Q9NYR9 191 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 CD300AQ9UGN4 299 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 MAU2Q9Y6X3 613 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 COL4A1P02462 1669 aa6.12□□□□□ -1.43
BDNF-211ENST00000439476 NEDD8-MDP1E9PL57 170 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 PRKYO43930 277 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 FCER2P06734 321 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 DCDC1P59894 354 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 KCNJ10P78508 379 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TARDBPQ13148 414 aaKnown RBP eCLIP6.11□□□□□ -1.43
BDNF-211ENST00000439476 FADDQ13158 208 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 RCAN2Q14206 197 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ZNF181Q2M3W8 571 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TMEM95Q3KNT9 176 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 CARD16Q5EG05 197 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MS4A13Q5J8X5 152 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 CXorf57Q6NSI4 855 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 ZNF367Q7RTV3 350 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SPRED1Q7Z699 444 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 C7orf61Q8IZ16 206 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 PELI3Q8N2H9 469 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 INO80EQ8NBZ0 244 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 OR13F1Q8NGS4 319 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 RFT1Q96AA3 541 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 HSH2DQ96JZ2 352 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SUSD3Q96L08 255 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 LURAP1Q96LR2 239 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TRNT1Q96Q11 434 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 CCM2Q9BSQ5 444 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 C16orf70Q9BSU1 422 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 NDC1Q9BTX1 674 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TMEM168Q9H0V1 697 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MAGIXQ9H6Y5 334 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MARK1Q9P0L2 795 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 COPS7AQ9UBW8 275 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 CDH7Q9ULB5 785 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 PIAS3Q9Y6X2 628 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 TRBV23-1A0A0A0MS06 115 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 A0A1B0GWJ7 208 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 KANTRA0A1W2PQU2 76 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SLC38A8A6NNN8 435 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MITFO75030 526 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 CLN5O75503 358 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ARNTP27540 789 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 DCTP40126 519 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 AVPR1BP47901 424 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 RPS24P62847 133 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 CREB5Q02930 508 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 BTN1A1Q13410 526 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ALKBH1Q13686 389 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 TSTQ16762 297 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 TCEAL6Q6IPX3 200 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 AMZ2Q86W34 360 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 SNX29P2Q8IUI4 249 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 CFAP206Q8IYR0 622 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 CLDN19Q8N6F1 224 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 PNLDC1Q8NA58 520 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 ZSCAN1Q8NBB4 408 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 FAM46DQ8NEK8 389 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 OR52N1Q8NH53 320 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms