RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ZNF226Q9NYT6 803 aa8.3□□□□□ -1.08
GABPB1-205ENST00000429662 TMCC3Q9ULS5 477 aa8.3□□□□□ -1.08
GABPB1-205ENST00000429662 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.3□□□□□ -1.08
GABPB1-205ENST00000429662 CLEC4EQ9ULY5 219 aa8.3□□□□□ -1.08
GABPB1-205ENST00000429662 MGAT4BQ9UQ53 548 aa8.3□□□□□ -1.08
GABPB1-205ENST00000429662 ERVK-11Q9UQG0 969 aa8.3□□□□□ -1.08
GABPB1-205ENST00000429662 TRAPPC4Q9Y296 219 aa8.3□□□□□ -1.08
GABPB1-205ENST00000429662 BTBD3Q9Y2F9 522 aa8.3□□□□□ -1.08
GABPB1-205ENST00000429662 C17orf113A0A1B0GUU1 675 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 A0A1W2PRB8 838 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 IRGMA1A4Y4 181 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 HTR3EA5X5Y0 456 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ZAR1LA6NP61 321 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 PDZK1P1A8MUH7 402 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 J3QL48 77 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 NPC1O15118 1278 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 TSPAN6O43657 245 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ASNA1O43681 348 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 BNIP3LO60238 219 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 LILRB3O75022 631 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 C1orf105O95561 183 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 C6orf47O95873 294 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ADORA3P0DMS8 318 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 DBTP11182 482 aaKnown RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ETFAP13804 333 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 CD46P15529 392 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 TIMP2P16035 220 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 CBLP22681 906 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 C21orf33P30042 268 aaPredicted RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 HSD17B2P37059 387 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 IDH2P48735 452 aaKnown RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 CRISP1P54107 249 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 HBA1P69905 142 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 TMEM115Q12893 351 aaPredicted RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 DNASE1L3Q13609 305 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 NCF4Q15080 339 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 BCL2A1Q16548 175 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ZNF805Q5CZA5 627 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 COLEC12Q5KU26 742 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 PLAG1Q6DJT9 500 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 REEP3Q6NUK4 255 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 NXPE4Q6UWF7 544 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ANGPTL8Q6UXH0 198 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ZNF765Q7L2R6 523 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 COMMD6Q7Z4G1 85 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 TSEN54Q7Z6J9 526 aaKnown RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 GALNT10Q86SR1 603 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 KRT78Q8N1N4 520 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 RASGEF1AQ8N9B8 481 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 CHST14Q8NCH0 376 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 OR9Q1Q8NGQ5 310 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 OR9A1PQ8NGU1 263 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 NFKBIDQ8NI38 313 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 UTP15Q8TED0 518 aaKnown RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 SLC5A11Q8WWX8 675 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 OR5P2Q8WZ92 322 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 RPL3LQ92901 407 aaKnown RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 UBE2FQ969M7 185 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 OTUB2Q96DC9 234 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ZNF764Q96H86 408 aaPredicted RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 CEP19Q96LK0 163 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 TRNT1Q96Q11 434 aaKnown RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 OR4K3Q96R72 315 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 CDCA3Q99618 268 aaPredicted RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 TCF25Q9BQ70 676 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 CDADC1Q9BWV3 514 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ALOXE3Q9BYJ1 711 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 PITHD1Q9GZP4 211 aaPredicted RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 C6orf62Q9GZU0 229 aaPredicted RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ABCG8Q9H221 673 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 A4GALTQ9NPC4 353 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 DMRT3Q9NQL9 472 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 DYRK4Q9NR20 520 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ASAH2Q9NR71 780 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ABCB10Q9NRK6 738 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 ACER3Q9NUN7 267 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 MS4A12Q9NXJ0 267 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 SPATA7Q9P0W8 599 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 AASSQ9UDR5 926 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 SEC14L4Q9UDX3 406 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 KLHL3Q9UH77 587 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 NDOR1Q9UHB4 597 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 CD84Q9UIB8 345 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 KCND3Q9UK17 655 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 PNMA8BQ9ULN7 279 aaPredicted RBP8.29□□□□□ -1.08
GABPB1-205ENST00000429662 IFT52Q9Y366 437 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 GRIP1Q9Y3R0 1128 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 KALRNO60229 2985 aa8.29□□□□□ -1.08
GABPB1-205ENST00000429662 TRBC2A0A5B9 178 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 PIPSLA2A3N6 862 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 OR2AG2A6NM03 316 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 C5orf58C9J3I9 102 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 FAAHO00519 579 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 DSCR3O14972 297 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 TEX28O15482 410 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 ZW10O43264 779 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 SEMA3DO95025 777 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 ETHE1O95571 254 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms