RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 FAM71CQ8NEG0 241 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 B3GNT7Q8NFL0 401 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 DMBX1Q8NFW5 382 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR5M9Q8NGP3 310 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR6P1Q8NGX9 317 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR10A6Q8NH74 314 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 NANPQ8TBE9 248 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 FAM110BQ8TC76 370 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 METTL6Q8TCB7 284 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZDHHC1Q8WTX9 485 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 RNF139Q8WU17 664 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 PIH1D2Q8WWB5 315 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 USP7Q93009 1102 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 ELP4Q96EB1 424 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZBED6CLQ96FA7 236 aaPredicted RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF419Q96HQ0 510 aaPredicted RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 LCORQ96JN0 433 aaPredicted RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 HS6ST2Q96MM7 605 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 CMTM3Q96MX0 182 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 TSGA13Q96PP4 275 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 NELL2Q99435 816 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 GMLQ99445 158 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 PKMYT1Q99640 499 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 OMDQ99983 421 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 DPH7Q9BTV6 452 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 CDCA7Q9BWT1 371 aaPredicted RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 NT5C1AQ9BXI3 368 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZCCHC2Q9C0B9 1178 aaKnown RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 POLR2J2Q9GZM3 115 aaKnown RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 ENKD1Q9H0I2 346 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 POLR3FQ9H1D9 316 aaPredicted RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 ABCG8Q9H221 673 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 REEP4Q9H6H4 257 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 WDR26Q9H7D7 661 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 PPP1R3EQ9H7J1 279 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 GBA2Q9HCG7 927 aaPredicted RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 AGO4Q9HCK5 861 aaKnown RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 FBRSL1Q9HCM7 1045 aaKnown RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 GALNT9Q9HCQ5 603 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 MRPS30Q9NP92 439 aaKnown RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 DLL4Q9NR61 685 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 C1GALT1Q9NS00 363 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 MS4A12Q9NXJ0 267 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 CBLCQ9ULV8 474 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 PPIEQ9UNP9 301 aaKnown RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 CLCA2Q9UQC9 943 aa5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 EXOSC1Q9Y3B2 195 aaKnown RBP5.37□□□□□ -1.55
VTI1BP4-201ENST00000427516 DICER1Q9UPY3 1922 aaKnown RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MICAL3Q7RTP6 2002 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 A0A087WZ62 844 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 A0A1W2PRQ8 180 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TMEM129A0AVI4 362 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 PMS2P1A4D2B8 440 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 FAM221BA6H8Z2 402 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC9B1P1A6NJY1 282 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SUPT3HB4E1H0 165 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 STMND1H3BQB6 276 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TNFRSF11BO00300 401 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 CACNB4O00305 520 aaPredicted RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MAN2B1O00754 1011 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SCAMP1O15126 338 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SUV39H1O43463 412 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MFSD11O43934 449 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TPST2O60704 377 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 CILPO75339 1184 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 KHDRBS3O75525 346 aaKnown RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 OAZ2O95190 189 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 EPOP01588 193 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TCRBP04435 133 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 STSP08842 583 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 LINC00032P0C843 101 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 PRPS2P11908 318 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 GNSP15586 552 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MGMTP16455 207 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ERCC2P18074 760 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 GABRB1P18505 474 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 RHCEP18577 417 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ITPKAP23677 461 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 PTAFRP25105 342 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ITGB8P26012 769 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 PTPN3P26045 913 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 S100A2P29034 98 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 C21orf33P30042 268 aaPredicted RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 HOXA13P31271 388 aaPredicted RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ETV5P41161 510 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 RFX3P48380 749 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MAN2A2P49641 1150 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 P2RY4P51582 365 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ARFIP1P53367 373 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 NRLP54845 237 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 EIF6P56537 245 aaKnown RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 CTBP2P56545 445 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 UFM1P61960 85 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ERVK-25P63136 954 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 E2F1Q01094 437 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 FPGSQ05932 587 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 FOXO1Q12778 655 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ECH1Q13011 328 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 CDH18Q13634 790 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 GRB7Q14451 532 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms