RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 DOHHQ9BU89 302 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 TMEM168Q9H0V1 697 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 POPDC3Q9HBV1 291 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 HCN3Q9P1Z3 774 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 SEC14L4Q9UDX3 406 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 PRSS21Q9Y6M0 314 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 MKI67P46013 3256 aaKnown RBP10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 CD8B2A6NJW9 211 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 CHURC1-FNTBB4DL54 471 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 SEPT4O43236 478 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 RAMP2O60895 175 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 RRASP10301 218 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 CD8BP10966 210 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 EPB42P16452 691 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 FABP5Q01469 135 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF273Q14593 569 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 CST9Q5W186 159 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 ALKAL2Q6UX46 152 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 LINGO4Q6UY18 593 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 SCD5Q86SK9 330 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 METTL23Q86XA0 190 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 KLHDC9Q8NEP7 349 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 GPR156Q8NFN8 814 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 HMGB4Q8WW32 186 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 UFD1Q92890 307 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 SGTBQ96EQ0 304 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 C12orf66Q96MD2 445 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 SECISBP2Q96T21 854 aaKnown RBP10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 C16orf70Q9BSU1 422 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 TSSK6Q9BXA6 273 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 ATG10Q9H0Y0 220 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 PPP1R3EQ9H7J1 279 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 NLGN3Q9NZ94 848 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 UBQLN2Q9UHD9 624 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 POFUT2Q9Y2G5 429 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 LSM2Q9Y333 95 aaKnown RBP10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 MAP4K5Q9Y4K4 846 aa10.77□□□□□ -0.69
SEC61A1-202ENST00000424880 RANBP2P49792 3224 aaKnown RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 PTP4A3O75365 173 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC25A14O95258 325 aaPredicted RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 CELF2O95319 508 aaKnown RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 HMGN1P05114 100 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 ALPIP09923 528 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 PTNP21246 168 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF140P52738 457 aaPredicted RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 POLR2GP62487 172 aaKnown RBP eCLIP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF91Q05481 1191 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 CRHR2Q13324 411 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 CRB2Q5IJ48 1285 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 MS4A13Q5J8X5 152 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 SFRP5Q5T4F7 317 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 RTL4Q6ZR62 310 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 GPR142Q7Z601 462 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 METTL3Q86U44 580 aaKnown RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 LINC01465Q8N7H1 131 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 BOLLQ8N9W6 283 aaKnown RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 NFKBIDQ8NI38 313 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 CIDECQ96AQ7 238 aaPredicted RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 KCTD7Q96MP8 289 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 TMEM43Q9BTV4 400 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC29A3Q9BZD2 475 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC6A17Q9H1V8 727 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 OR51B5Q9H339 312 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 NMNAT1Q9HAN9 279 aaPredicted RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 MRPL15Q9P015 296 aaKnown RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 FBXL2Q9UKC9 423 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 RAB23Q9ULC3 237 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 CKAP5Q14008 2032 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 TRBV4-1A0A0J9YWV2 114 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 A0A1B0GVM2 712 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 TLR4O00206 839 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC28A1O00337 649 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 EEF1E1O43324 174 aaKnown RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 PROM1O43490 865 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 KDM4BO94953 1096 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 GADD45GO95257 159 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 WDPCPO95876 746 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 CBX7O95931 251 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 APOC3P02656 99 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 FGF1P05230 155 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 TPOP07202 933 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 PBX3P40426 434 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 PNPLA4P41247 253 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 ACVR1Q04771 509 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 PUDPQ08623 228 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 TWF1Q12792 350 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 MAD2L1Q13257 205 aaPredicted RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 PCBP2Q15366 365 aaKnown RBP eCLIP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 DUOXA1Q1HG43 343 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 ZXDCQ2QGD7 858 aaPredicted RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 TIGD5Q53EQ6 642 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF628Q5EBL2 1059 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 SPRYD7Q5W111 196 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 MAMSTRQ6ZN01 415 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 TOP6BLQ8N6T0 577 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 OTULINQ96BN8 352 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 COQ10AQ96MF6 247 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 FOPNLQ96NB1 174 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 NLE1Q9NVX2 485 aaPredicted RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 NDUFB11Q9NX14 153 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms