RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 REEP4Q9H6H4 257 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 B3GAT2Q9NPZ5 323 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 CFAP97Q9P2B7 532 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 ZNF282Q9UDV7 671 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 IL20RAQ9UHF4 553 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 SCN8AQ9UQD0 1980 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 GLTPD2A6NH11 291 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 ZNF670-ZNF695F2Z2N8 137 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 HPGDSO60760 199 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 SCO1O75880 301 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 IFNW1P05000 195 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 RBBP4Q09028 425 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 HSPB3Q12988 150 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 GLYR1Q49A26 553 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 YIF1BQ5BJH7 314 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 LYPLAL1Q5VWZ2 237 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 CCSAPQ6IQ19 270 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 OR4M1Q8NGD0 313 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 C16orf78Q8WTQ4 265 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 KLHL6Q8WZ60 621 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 CLP1Q92989 425 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 SCLYQ96I15 445 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 GALNT9Q9HCQ5 603 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 SSR3Q9UNL2 185 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 PRKAB1Q9Y478 270 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 PLXNB3Q9ULL4 1909 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 A0A075B6Q4 140 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 A0A1W2PRB8 838 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 C12orf71A8MTZ7 269 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 PRRG1O14668 218 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 ARHGEF15O94989 841 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 CKMP06732 381 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 XKP51811 444 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 MLLT1Q03111 559 aaPredicted RBP13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 SCN1BQ07699 218 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 CNTN1Q12860 1018 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 TATDN3Q17R31 274 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 TIMM50Q3ZCQ8 353 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 CCDC149Q6ZUS6 474 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 YIPF4Q9BSR8 244 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 UCK2Q9BZX2 261 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 KCNK12Q9HB15 430 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 STUB1Q9UNE7 303 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 ALG5Q9Y673 324 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 MYL12BO14950 172 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 HRO43593 1189 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 B4GALT2O60909 372 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 CH25HO95992 272 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 FURINP09958 794 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 OR12D1P0DN82 309 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 PXNP49023 591 aaPredicted RBP13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 BTBD16Q32M84 506 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 CRTC2Q53ET0 693 aaPredicted RBP13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 ANXA8L1Q5VT79 327 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 TYW3Q6IPR3 259 aaKnown RBP13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 LHFPL3Q86UP9 236 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 BMPERQ8N8U9 685 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 RASGEF1AQ8N9B8 481 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 OR5D16Q8NGK9 328 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 CREB3L4Q8TEY5 395 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 SLC38A5Q8WUX1 472 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 FRMD6Q96NE9 622 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 SLC22A4Q9H015 551 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 RNF121Q9H920 327 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 TRAPPC4Q9Y296 219 aa13.87□□□□□ -0.19
SEMA3F-202ENST00000413852 HLA-FP30511 346 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 ACLYP53396 1101 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 GRHL2Q6ISB3 625 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 TCTN3Q6NUS6 607 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 UNC5DQ6UXZ4 953 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 USP45Q70EL2 814 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 SLC38A6Q8IZM9 456 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 OR5H6Q8NGV6 325 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 ENKURQ8TC29 256 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 ZBED6CLQ96FA7 236 aaPredicted RBP13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 HDHD5Q9BXW7 423 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 POLR2J3Q9H1A7 115 aaKnown RBP13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 RC3H2Q9HBD1 1191 aaKnown RBP13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 C3orf14Q9HBI5 128 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 C2orf92A0A1B0GVN3 265 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 SHISA3A0PJX4 238 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 ZSCAN5BA6NJL1 495 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 EIF3FO00303 357 aaPredicted RBP13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 RNASET2O00584 256 aaKnown RBP13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 RAB8AP61006 207 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 TBPL1P62380 186 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 CLEC12AQ5QGZ9 265 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 NANOGP1Q8N7R0 232 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 OR52I1Q8NGK6 324 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 SLC7A13Q8TCU3 470 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 REPS1Q96D71 796 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 TMEM19Q96HH6 336 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 LRR1Q96L50 414 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 QRSL1Q9H0R6 528 aaKnown RBP13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 EGLN3Q9H6Z9 239 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 HYKKA2RU49 373 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 GSAPA4D1B5 854 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 FRS3O43559 492 aa13.86□□□□□ -0.19
SEMA3F-202ENST00000413852 PRMT3O60678 531 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms