RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SMIM11AP58511 58 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 ALDH6A1Q02252 535 aaKnown RBP16.78■□□□□ 0.28
SDCBP-202ENST00000413219 Q5BKY6 102 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 LCN1P1Q5VSP4 162 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 SYCE2Q6PIF2 218 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 DNAJB7Q7Z6W7 309 aaPredicted RBP16.78■□□□□ 0.28
SDCBP-202ENST00000413219 ZFAND1Q8TCF1 268 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 AP3S1Q92572 193 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 ZC3HAV1LQ96H79 300 aaKnown RBP16.78■□□□□ 0.28
SDCBP-202ENST00000413219 NELL2Q99435 816 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 NLNQ9BYT8 704 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 ISYNA1Q9NPH2 558 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 DKK3Q9UBP4 350 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 A0A0B4J293 547 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 SLC5A10A0PJK1 596 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 HEPACAM2A8MVW5 462 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 H1F0P07305 194 aaKnown RBP16.77■□□□□ 0.28
SDCBP-202ENST00000413219 TSPAN19P0C672 248 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 FEN1P39748 380 aaKnown RBP16.77■□□□□ 0.28
SDCBP-202ENST00000413219 KIR2DL3P43628 341 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 TGM4P49221 684 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 FLT3LGP49771 235 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 STK19P49842 368 aaPredicted RBP16.77■□□□□ 0.28
SDCBP-202ENST00000413219 POLR2LP62875 67 aaKnown RBP16.77■□□□□ 0.28
SDCBP-202ENST00000413219 SEC23BQ15437 767 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 RNF180Q86T96 592 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 PLCZ1Q86YW0 608 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 TCEANCQ8N8B7 351 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 WDR48Q8TAF3 677 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 ENKURQ8TC29 256 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 RNF31Q96EP0 1072 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 KCTD7Q96MP8 289 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 FOPNLQ96NB1 174 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 POLDIP3Q9BY77 421 aaKnown RBP16.77■□□□□ 0.28
SDCBP-202ENST00000413219 POLR2J3Q9H1A7 115 aaKnown RBP16.77■□□□□ 0.28
SDCBP-202ENST00000413219 ZDHHC6Q9H6R6 413 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 NIPAL2Q9H841 368 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 ANKRA2Q9H9E1 313 aa16.77■□□□□ 0.28
SDCBP-202ENST00000413219 NFKBIL1Q9UBC1 381 aaPredicted RBP16.77■□□□□ 0.28
SDCBP-202ENST00000413219 TMEM202A6NGA9 273 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 C5orf58C9J3I9 102 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 H3BN98 237 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 PLA2G10O15496 165 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 PROM1O43490 865 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 OR10H3O60404 316 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 KLHL18O94889 574 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 SOX14O95416 240 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 CTSOP43234 321 aaPredicted RBP16.77■□□□□ 0.27
SDCBP-202ENST00000413219 TAS2R50P59544 299 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 MXD1Q05195 221 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 PLK5Q496M5 336 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 CCDC58Q4VC31 144 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 PGBD2Q6P3X8 592 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 USP30Q70CQ3 517 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 GPR65Q8IYL9 337 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 TRAM1L1Q8N609 369 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 FBXO15Q8NCQ5 510 aaPredicted RBP16.77■□□□□ 0.27
SDCBP-202ENST00000413219 DBF4BQ8NFT6 615 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 ZIC5Q96T25 663 aa16.77■□□□□ 0.27
SDCBP-202ENST00000413219 OR2AG2A6NM03 316 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 BNIP3LO60238 219 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 MYCP01106 439 aaPredicted RBP16.76■□□□□ 0.27
SDCBP-202ENST00000413219 C1GALT1C1LP0DN25 315 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 CYP2A6P11509 494 aaPredicted RBP16.76■□□□□ 0.27
SDCBP-202ENST00000413219 GPC1P35052 558 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 DGKGP49619 791 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 DGKEP52429 567 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 SLBPQ14493 270 aaKnown RBP eCLIP16.76■□□□□ 0.27
SDCBP-202ENST00000413219 PYDC2Q56P42 97 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF628Q5EBL2 1059 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 C3orf38Q5JPI3 329 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 HIST2H2AA3Q6FI13 130 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 KIAA1841Q6NSI8 718 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 TCTN3Q6NUS6 607 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 CEACAM20Q6UY09 585 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 HTR3DQ70Z44 454 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 GPR32P1Q8NGA4 272 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 OR52I1Q8NGK6 324 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 ANGPTL6Q8NI99 470 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 TTC9Q92623 222 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 SCAMP4Q969E2 229 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 LMLNQ96KR4 655 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 FUZQ9BT04 418 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 TMEM121BQ9BXQ6 578 aaPredicted RBP16.76■□□□□ 0.27
SDCBP-202ENST00000413219 TESQ9UGI8 421 aaKnown RBP16.76■□□□□ 0.27
SDCBP-202ENST00000413219 ACAD8Q9UKU7 415 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 DYRK1BQ9Y463 629 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 PITPNM1O00562 1244 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 TSPAN6O43657 245 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 ATG13O75143 517 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 GBAP04062 536 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 IGFBP1P08833 259 aaPredicted RBP16.76■□□□□ 0.27
SDCBP-202ENST00000413219 SELPP16109 830 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 PTBP1P26599 531 aaKnown RBP eCLIP16.76■□□□□ 0.27
SDCBP-202ENST00000413219 VIPR1P32241 457 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 PPP3R1P63098 170 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 CD83Q01151 205 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 FAPQ12884 760 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 COX10Q12887 443 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 CRHR2Q13324 411 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms