RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 MLLT10P55197 1068 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 KIR2DS3Q14952 304 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 NR0B2Q15466 257 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 DPY19L1Q2PZI1 675 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 DHRS13Q6UX07 377 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 CYHR1Q6ZMK1 362 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 FAM81AQ8TBF8 368 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 CMKLR1Q99788 373 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 NUDT22Q9BRQ3 303 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.83□□□□□ -0.68
SNX13-202ENST00000409604 METTL7AQ9H8H3 244 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 TCF20Q9UGU0 1960 aaKnown RBP10.83□□□□□ -0.68
SNX13-202ENST00000409604 TMEM221A6NGB7 291 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 M0R296 226 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PLD2O14939 933 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 CER1O95813 267 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 SBK3P0C264 359 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 IMPDH2P12268 514 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 RBMS1P29558 406 aaKnown RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 CSNK1G2P78368 415 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 VWA2Q5GFL6 755 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 SLC35F1Q5T1Q4 408 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PLPP6Q8IY26 295 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 ZNF548Q8NEK5 533 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 PJA1Q8NG27 643 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.82□□□□□ -0.683e-7■■■■■ 37.7
SNX13-202ENST00000409604 EZH1Q92800 747 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 SLC7A6OSQ96CW6 309 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 TTTY10Q9BZA0 68 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 TMED5Q9Y3A6 229 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PCDHGB3Q9Y5G1 929 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 AP4B1Q9Y6B7 739 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 LOC100506127A0A0U1RQW1 187 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 RGS5O15539 181 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 SCRG1O75711 98 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 GADD45GO95257 159 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 TSPAN12O95859 305 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 UQCRBP14927 111 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 HIST1H1TP22492 207 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 ACADLP28330 430 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 CLDN8P56748 225 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 ALG1LQ6GMV1 187 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 LARP4Q71RC2 724 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNX13-202ENST00000409604 LRRC25Q8N386 305 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 FAM98AQ8NCA5 519 aaKnown RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 PROKR1Q8TCW9 393 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 NMD3Q96D46 503 aaKnown RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 HSH2DQ96JZ2 352 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 SMURF2Q9HAU4 748 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 POT1Q9NUX5 634 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 BLOC1S6Q9UL45 172 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 ATG4BQ9Y4P1 393 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PCDHGA2Q9Y5H1 932 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 C4orf47A7E2U8 309 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 WWP2O00308 870 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PGRMC2O15173 223 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 HMGN2P05204 90 aaKnown RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 LINGO3P0C6S8 592 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PIM1P11309 404 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 UGT2B15P54855 530 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 FLYWCH1Q4VC44 716 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 IFI44LQ53G44 452 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 DCST1Q5T197 706 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 CES4AQ5XG92 561 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 LUZP2Q86TE4 346 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PPP1R3BQ86XI6 285 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 HOMEZQ8IX15 550 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 FAM217AQ8IXS0 508 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PIK3C3Q8NEB9 887 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 EFHD2Q96C19 240 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 PKP2Q99959 881 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 SPRTNQ9H040 489 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 EURLQ9NYK6 297 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 P2RX2Q9UBL9 471 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 MED12Q93074 2177 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PSIP1O75475 530 aaKnown RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 APOL3O95236 402 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PORP16435 677 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 MAOAP21397 527 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 KHKP50053 298 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 FOLH1Q04609 750 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 DPTQ07507 201 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 ENPP2Q13822 863 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 SLC14A2Q15849 920 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 FCRLBQ6BAA4 426 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 LCTLQ6UWM7 567 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 ZNF605Q86T29 641 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 OR2L5Q8NG80 312 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 KIAA1143Q96AT1 154 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 ZNF570Q96NI8 536 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 TBX5Q99593 518 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 ZNF624Q9P2J8 865 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 SLC6A14Q9UN76 642 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 ICKQ9UPZ9 632 aa10.82□□□□□ -0.68
SNX13-202ENST00000409604 PCYT1BQ9Y5K3 369 aaPredicted RBP10.82□□□□□ -0.68
SNX13-202ENST00000409604 SPTBN1Q01082 2364 aaKnown RBP10.81□□□□□ -0.68
SNX13-202ENST00000409604 DYTNA2CJ06 578 aa10.81□□□□□ -0.68
SNX13-202ENST00000409604 LSM1O15116 133 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms