RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TRILQ7L0X0 811 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 UBE3DQ7Z6J8 389 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 CREG2Q8IUH2 290 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 CLYBLQ8N0X4 340 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 FAM109AQ8N4B1 249 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 TMEM251Q8N6I4 163 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 SNX31Q8N9S9 440 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 GOLM1Q8NBJ4 401 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 SRFBP1Q8NEF9 429 aaKnown RBP8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 C7orf57Q8NEG2 295 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 OR10Q1Q8NGQ4 319 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 SLC2A12Q8TD20 617 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 TSPAN17Q96FV3 270 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 SCYL1Q96KG9 808 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 SGCZQ96LD1 299 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 KCNC2Q96PR1 638 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 SMC6Q96SB8 1091 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 MAPKAP1Q9BPZ7 522 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 ZNF559Q9BR84 538 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 TTYH2Q9BSA4 534 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 TBCDQ9BTW9 1192 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 EFCAB11Q9BUY7 163 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 TRIM31Q9BZY9 425 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 CXXC4Q9H2H0 198 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 CAB39LQ9H9S4 337 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 IL1RL2Q9HB29 575 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 SMYD2Q9NRG4 433 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 SACM1LQ9NTJ5 587 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 TRMT1Q9NXH9 659 aaKnown RBP8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 CD274Q9NZQ7 290 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 KCNN3Q9UGI6 736 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 PTBP2Q9UKA9 531 aaKnown RBP8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 ATP6AP2A0A1C7CYW4 349 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 FIGNL2A6NMB9 653 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 EFCAB8A8MWE9 144 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 AQP7O14520 342 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 SIAH2O43255 324 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 KLK8O60259 260 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 SUSD5O60279 629 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 CCNT2O60583 730 aaKnown RBP8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ZNF354AO60765 605 aaPredicted RBP8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ATP6AP2O75787 350 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ETHE1O95571 254 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 P04436 131 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 GLI4P10075 376 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 CD1DP15813 335 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 EPORP19235 508 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ATP5A1P25705 553 aaKnown RBP8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 CASP2P42575 452 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 MSH2P43246 934 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 MAGEA5P43359 124 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ZFP36L2P47974 494 aaKnown RBP8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 MAN2A2P49641 1150 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ATP6V0D1P61421 351 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ID2Q02363 134 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 IRF8Q02556 426 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 FOXO1Q12778 655 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 CHIT1Q13231 466 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 SLC10A1Q14973 349 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 OR4D1Q15615 310 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 CEBPEQ15744 281 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 TBCCQ15814 346 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 MPEG1Q2M385 716 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 HYAL4Q2M3T9 481 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 AP5B1Q2VPB7 878 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 TMEM35AQ53FP2 167 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 PIGGQ5H8A4 983 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 RTL6Q6ICC9 239 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 B3GNT6Q6ZMB0 384 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ZNF793Q6ZN11 406 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 CXXC5Q7LFL8 322 aaKnown RBP8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 TMEM200AQ86VY9 491 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ZBED8Q8IZ13 594 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ACOT4Q8N9L9 421 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 PDPRQ8NCN5 879 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ZNF721Q8TF20 911 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ZNF473Q8WTR7 871 aaKnown RBP8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ANKRD9Q96BM1 317 aaPredicted RBP8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 SENP5Q96HI0 755 aaPredicted RBP8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 MS4A8Q9BY19 250 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 CD244Q9BZW8 370 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 LIME1Q9H400 295 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 LDAHQ9H6V9 325 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 TUBA8Q9NY65 449 aaPredicted RBP8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 COPS7AQ9UBW8 275 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 ACAD8Q9UKU7 415 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 LIPGQ9Y5X9 500 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 SPACA6W5XKT8 324 aa8.47□□□□□ -1.05
NIF3L1-203ENST00000409129 A0A0G2JNJ9 132 aa8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 CXorf49A8MYA2 514 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 CCDC188H7C350 402 aa8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 RTCAO00442 366 aaKnown RBP8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 PHGDHO43175 533 aaKnown RBP8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 HCN1O60741 890 aa8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 TGFB1P01137 390 aa8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 S100BP04271 92 aaPredicted RBP8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 CELA3AP09093 270 aa8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 CCL3P10147 92 aa8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 COX7A2P14406 83 aa8.46□□□□□ -1.06
NIF3L1-203ENST00000409129 STMN1P16949 149 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms