RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 ZNF10P21506 573 aaPredicted RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 PBX2P40425 430 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 PXNP49023 591 aaPredicted RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 ZNF630Q2M218 657 aaPredicted RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 WSCD2Q2TBF2 565 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 KHDRBS2Q5VWX1 349 aaKnown RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 KIAA1161Q6NSJ0 714 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 SNX29P2Q8IUI4 249 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 NRSN1Q8IZ57 195 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 MTERF3Q96E29 417 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 AHCYL2Q96HN2 611 aaKnown RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 COG8Q96MW5 612 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 BARD1Q99728 777 aaKnown RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 NEK6Q9HC98 313 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 CLEC4AQ9UMR7 237 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 ZFC3H1O60293 1989 aaKnown RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 FAM25AB3EWG3 89 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 FAM25CB3EWG5 89 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 FAM25GB3EWG6 89 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 MPIP34949 423 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 ST3GAL4Q11206 333 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 CDK5R2Q13319 367 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 GAB1Q13480 694 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 PIN1Q13526 163 aaPredicted RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 ANKDD1AQ495B1 522 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 NDUFAF5Q5TEU4 345 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 PNCKQ6P2M8 343 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 LILRA6Q6PI73 481 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 CROCCP3Q8IVE0 287 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 KLHDC8BQ8IXV7 354 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 TMEFF1Q8IYR6 380 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 IQCF1Q8N6M8 205 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 SLC38A4Q969I6 547 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 ANKRA2Q9H9E1 313 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 PRSS16Q9NQE7 514 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 P2RX2Q9UBL9 471 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 EDARQ9UNE0 448 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 TRBV5-4A0A0C4DH59 114 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 TMEM127O75204 238 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 LAMP2P13473 410 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 SMIM11AP58511 58 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 STXBP1P61764 594 aaKnown RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 STX4Q12846 297 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 MINDY4Q4G0A6 757 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 IQCCQ4KMZ1 466 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 ARMCX4Q5H9R4 360 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 ZNF311Q5JNZ3 666 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 FAM83HQ6ZRV2 1179 aaPredicted RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 FRMD1Q8N878 549 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 L3MBTL4Q8NA19 623 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 OR4K3Q96R72 315 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 DCSTAMPQ9H295 470 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 OR51I1Q9H343 314 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 MBNL1Q9NR56 388 aaKnown RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 SNTG1Q9NSN8 517 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 CAB39Q9Y376 341 aaPredicted RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 PRAMEF33A0A0G2JMD5 474 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 SLC35F4A4IF30 521 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 CLDN25C9JDP6 229 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 SLCO2B1O94956 709 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 KCNK5O95279 499 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 C1QCP02747 245 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 IFNGR2P38484 337 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 NKX3-2P78367 333 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 IRF4Q15306 451 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 TAB1Q15750 504 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 DEFB110Q30KQ9 67 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 LEXMQ3ZCV2 418 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 CHDHQ8NE62 594 aaPredicted RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 SRFBP1Q8NEF9 429 aaKnown RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 FCRL4Q96PJ5 515 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 C1QTNF3Q9BXJ4 246 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 IL1RAPQ9NPH3 570 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 SLC23A2Q9UGH3 650 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 MKLN1Q9UL63 735 aa12.86□□□□□ -0.35
SIRPA-203ENST00000400068 MRPS7Q9Y2R9 242 aaKnown RBP12.86□□□□□ -0.35
SIRPA-203ENST00000400068 SH3D21A4FU49 640 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 HSD3B1P14060 373 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 BMP7P18075 431 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 IL1RNP18510 177 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 HSD3B2P26439 372 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 C21orf33P30042 268 aaPredicted RBP12.85□□□□□ -0.35
SIRPA-203ENST00000400068 ZNF155Q12901 538 aaPredicted RBP12.85□□□□□ -0.35
SIRPA-203ENST00000400068 TSTQ16762 297 aaKnown RBP12.85□□□□□ -0.35
SIRPA-203ENST00000400068 ZNF750Q32MQ0 723 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 PTRH1Q86Y79 214 aaKnown RBP12.85□□□□□ -0.35
SIRPA-203ENST00000400068 KLHDC8AQ8IYD2 350 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 ZFAND2BQ8WV99 257 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 SLC38A2Q96QD8 506 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 POLR2J2Q9GZM3 115 aaKnown RBP12.85□□□□□ -0.35
SIRPA-203ENST00000400068 BTBD1Q9H0C5 482 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 OR51V1Q9H2C8 321 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 MALT1Q9UDY8 824 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 HCN4Q9Y3Q4 1203 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 PDCD11Q14690 1871 aaKnown RBP12.85□□□□□ -0.35
SIRPA-203ENST00000400068 BTN3A3O00478 584 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 SNX4O95219 450 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 CERS1P27544 350 aa12.85□□□□□ -0.35
SIRPA-203ENST00000400068 RPS21P63220 83 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms