RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 LOC100130705A0A1B0GUX0 176 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 SRCP12931 536 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 CDH11P55287 796 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 RPS3AP61247 264 aaKnown RBP13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 GALK2Q01415 458 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 CBLBQ13191 982 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 SWT1Q5T5J6 900 aaKnown RBP13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 TOMM5Q8N4H5 51 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 OR6N2Q8NGY6 317 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 HSPA12BQ96MM6 686 aa13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 ERMAPQ96PL5 475 aaPredicted RBP13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 POLDIP3Q9BY77 421 aaKnown RBP13.66□□□□□ -0.22
PCDHA11-201ENST00000398640 E2F3O00716 465 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 OR12D1P0DN82 309 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 IRS1P35568 1242 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 WDR4P57081 412 aaKnown RBP13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 ACSBG2Q5FVE4 666 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 B3GNT9Q6UX72 402 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 LIX1LQ8IVB5 337 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 UMODL1-AS1Q8N2C9 162 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 CPXM2Q8N436 756 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 INO80EQ8NBZ0 244 aaPredicted RBP13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 GALNT11Q8NCW6 608 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 LRRC15Q8TF66 581 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 TMEM41AQ96HV5 264 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 AIFM2Q9BRQ8 373 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 MARCH5Q9NX47 278 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 TAS2R1Q9NYW7 299 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 hCG_1807616A0A1W2PRN6 198 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 ADAM12O43184 909 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 CREG1O75629 220 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 IFNA21P01568 189 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 IRF2P14316 349 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 ITIH1P19827 911 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 DMWDQ09019 674 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 PAMR1Q6UXH9 720 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 PAQR7Q86WK9 346 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 DENND6BQ8NEG7 585 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 SLCO2A1Q92959 643 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 AASSQ9UDR5 926 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 WASF3Q9UPY6 502 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 LCHNA4D1U4 455 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 GLDCP23378 1020 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC6A4P31645 630 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 SNU13P55769 128 aaKnown RBP13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 IGDCC3Q8IVU1 814 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 ASB9Q96DX5 294 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 HERPUD2Q9BSE4 406 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 CAPN5O15484 640 aaPredicted RBP13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 ENTPD6O75354 484 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 H6PDO95479 791 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 GJA4P35212 333 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 ARG2P78540 354 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 PPP1R3AQ16821 1122 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 WSCD2Q2TBF2 565 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 RABL3Q5HYI8 236 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 NKAPLQ5M9Q1 402 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 TRMT10AQ8TBZ6 339 aaKnown RBP13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 C14orf105Q9NVL8 296 aa13.65□□□□□ -0.22
PCDHA11-201ENST00000398640 PCP4L1A6NKN8 68 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 RAB36O95755 333 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 AOC1P19801 751 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 SLC6A11P48066 632 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 GSK3BP49841 420 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 BLMHQ13867 455 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 ASTE1Q2TB18 679 aaPredicted RBP13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 KCTD9Q7L273 389 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 ASB15Q8WXK1 588 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 DIO2Q92813 273 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 RBP7Q96R05 134 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 PRODH2Q9UF12 536 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 BAIAP2Q9UQB8 552 aa13.65□□□□□ -0.23
PCDHA11-201ENST00000398640 TEX13DA0A0J9YY54 714 aaPredicted RBP13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 TRIM64BA6NI03 449 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 FAM72CH0Y354 149 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 SLAMF1Q13291 335 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 OGFRL1Q5TC84 451 aaPredicted RBP13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 FAM72AQ5TYM5 149 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 FAM72DQ6L9T8 149 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 NCEH1Q6PIU2 408 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 FAM72BQ86X60 149 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 PLCZ1Q86YW0 608 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 UBALD2Q8IYN6 164 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 CCDC107Q8WV48 283 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 PRDM4Q9UKN5 801 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 FBXL3Q9UKT7 428 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 C14orf166Q9Y224 244 aaKnown RBP13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 TMX2-CTNND1H3BSU7 103 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 H3BUI4 141 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 NUAK1O60285 661 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 CDRT1O95170 752 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 SLC6A6P31641 620 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF84P51523 738 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 HERC3Q15034 1050 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 CYBRD1Q53TN4 286 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 NIPAL1Q6NVV3 410 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 PIGWQ7Z7B1 504 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms