RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 SIMC1Q8NDZ2 872 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 NLGN4YQ8NFZ3 816 aaPredicted RBP13.09□□□□□ -0.31
COL6A2-203ENST00000397763 C1GALT1C1Q96EU7 318 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 YIPF4Q9BSR8 244 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 TSSK6Q9BXA6 273 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 CXorf36Q9H7Y0 433 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 MIEF1Q9NQG6 463 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 SPEF1Q9Y4P9 236 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 HSPB11Q9Y547 144 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 SPIN1Q9Y657 262 aaPredicted RBP13.09□□□□□ -0.31
COL6A2-203ENST00000397763 ENPP4Q9Y6X5 453 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 A0A0B4J293 547 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 MRPS14O60783 128 aaKnown RBP13.09□□□□□ -0.31
COL6A2-203ENST00000397763 ARHGEF15O94989 841 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 TSPAN19P0C672 248 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 ITGA2P17301 1181 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 SDC2P34741 201 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 CD79BP40259 229 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 CRYBB2P43320 205 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 ZNF763Q0D2J5 394 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 BTBD16Q32M84 506 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 ATAT1Q5SQI0 421 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 GRHL2Q6ISB3 625 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 MED27Q6P2C8 311 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 YIPF7Q8N8F6 280 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 OR52N2Q8NGI0 321 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 GRPEL2Q8TAA5 225 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 C16orf78Q8WTQ4 265 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 GEMIN6Q8WXD5 167 aaKnown RBP13.09□□□□□ -0.31
COL6A2-203ENST00000397763 RNF31Q96EP0 1072 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 CRELD1Q96HD1 420 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 CCDC32Q9BV29 185 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 STMN3Q9NZ72 180 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 KCNE2Q9Y6J6 123 aa13.09□□□□□ -0.31
COL6A2-203ENST00000397763 A0A1W2PQ45 241 aaPredicted RBP13.08□□□□□ -0.31
COL6A2-203ENST00000397763 A0A1W2PQY0 241 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 HMX3A6NHT5 357 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 ZAR1LA6NP61 321 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 C5orf58C9J3I9 102 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 M0R3H8 397 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 PRMT3O60678 531 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 PSKH1P11801 424 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 CD72P21854 359 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 ASMTP46597 345 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 PTPN5P54829 565 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 ZNF91Q05481 1191 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 ARSIQ5FYB1 569 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 HCAR2Q8TDS4 363 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 PCNPQ8WW12 178 aaKnown RBP13.08□□□□□ -0.31
COL6A2-203ENST00000397763 GATAD2BQ8WXI9 593 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 RACGAP1Q9H0H5 632 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 KCNK12Q9HB15 430 aa13.08□□□□□ -0.31
COL6A2-203ENST00000397763 MN1Q10571 1320 aaPredicted RBP13.08□□□□□ -0.32
COL6A2-203ENST00000397763 A0A1B0GVC2 190 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 FABP12A6NFH5 140 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 A6NIN4 97 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 ARHGEF9O43307 516 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 PQBP1O60828 265 aaKnown RBP13.08□□□□□ -0.32
COL6A2-203ENST00000397763 FURINP09958 794 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 SELPP16109 830 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 APEX1P27695 318 aaKnown RBP13.08□□□□□ -0.32
COL6A2-203ENST00000397763 RORCP51449 518 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 SCN1BQ07699 218 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 MAP4K2Q12851 820 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 GRIN2CQ14957 1233 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 FLYWCH1Q4VC44 716 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 METTL2BQ6P1Q9 378 aaKnown RBP13.08□□□□□ -0.32
COL6A2-203ENST00000397763 CASP12Q6UXS9 341 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 SLCO4C1Q6ZQN7 724 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 COMTD1Q86VU5 262 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 NATD1Q8N6N6 113 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 ZNF557Q8N988 423 aaPredicted RBP13.08□□□□□ -0.32
COL6A2-203ENST00000397763 FAM46DQ8NEK8 389 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 OR5D16Q8NGK9 328 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 FCRL1Q96LA6 429 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 CDCA4Q9BXL8 241 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 SLAMF7Q9NQ25 335 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 IL20RAQ9UHF4 553 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 SNX7Q9UNH6 387 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 GRIP1Q9Y3R0 1128 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 IGLV3-16A0A075B6K0 115 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 H0YIV9 168 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 RNASET2O00584 256 aaKnown RBP13.08□□□□□ -0.32
COL6A2-203ENST00000397763 PRKYO43930 277 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 LEFTY1O75610 366 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 KLHL18O94889 574 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 CATP04040 527 aaKnown RBP13.08□□□□□ -0.32
COL6A2-203ENST00000397763 HOXB6P17509 224 aaKnown RBP13.08□□□□□ -0.32
COL6A2-203ENST00000397763 ETV5P41161 510 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 ETV1P50549 477 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 XKP51811 444 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 MLLT1Q03111 559 aaPredicted RBP13.08□□□□□ -0.32
COL6A2-203ENST00000397763 TIMM50Q3ZCQ8 353 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 PLEKHS1Q5SXH7 462 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 TYW3Q6IPR3 259 aaKnown RBP13.08□□□□□ -0.32
COL6A2-203ENST00000397763 TRIM40Q6P9F5 258 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 ZNF783Q6ZMS7 281 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 GPR32P1Q8NGA4 272 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 SLC38A5Q8WUX1 472 aa13.08□□□□□ -0.32
COL6A2-203ENST00000397763 EXOSC8Q96B26 276 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms