RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 FAAHO00519 579 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 IFNA2P01563 188 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 FCER2P06734 321 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 ITGA5P08648 1049 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 FXYD6P3P58550 94 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 OLIG2Q13516 323 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 C10orf62Q5T681 223 aaPredicted RBP13.43□□□□□ -0.26
SNPH-201ENST00000381867 DCDC5Q6ZRR9 648 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 FUNDC2Q9BWH2 189 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 NSUN3Q9H649 340 aaKnown RBP13.43□□□□□ -0.26
SNPH-201ENST00000381867 TMEM185BQ9H7F4 350 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 PCDH10Q9P2E7 1040 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 MGAT4CQ9UBM8 478 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 KCNN3Q9UGI6 736 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 ZFR2Q9UPR6 939 aaKnown RBP13.43□□□□□ -0.26
SNPH-201ENST00000381867 HSPE1-MOB4S4R3N1 261 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 COCHO43405 550 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 PRKYO43930 277 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 TNFP01375 233 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 HCKP08631 526 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 CKMT1AP12532 417 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 RBMXP38159 391 aaKnown RBP13.43□□□□□ -0.26
SNPH-201ENST00000381867 CASRP41180 1078 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 PPP5CP53041 499 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 RPS13P62277 151 aaKnown RBP13.43□□□□□ -0.26
SNPH-201ENST00000381867 CEACAM7Q14002 265 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 PUS10Q3MIT2 529 aaKnown RBP13.43□□□□□ -0.26
SNPH-201ENST00000381867 TICAM1Q8IUC6 712 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 TCEAL8Q8IYN2 117 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 OR51G2Q8NGK0 314 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 MTG2Q9H4K7 406 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 RGCCQ9H4X1 137 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 TAC3Q9UHF0 121 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 NPIPA5E9PKD4 350 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 PCDH17O14917 1159 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 PCDHGA12O60330 932 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 RBBP9O75884 186 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 CNTN5O94779 1100 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 NFATC3Q12968 1075 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 MFSD2AQ8NA29 543 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 SMPDL3AQ92484 453 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 MGLLQ99685 303 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 NPIPA1Q9UND3 350 aa13.43□□□□□ -0.26
SNPH-201ENST00000381867 ARPC4-TTLL3A0A0A6YYG9 625 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 TEX13CA0A0J9YWL9 993 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 FOXD2O60548 495 aaPredicted RBP13.42□□□□□ -0.26
SNPH-201ENST00000381867 NR2C1P13056 603 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 GTF2F2P13984 249 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 DCKP27707 260 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 ARSKQ6UWY0 536 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 SETD7Q8WTS6 366 aaKnown RBP13.42□□□□□ -0.26
SNPH-201ENST00000381867 DGAT2Q96PD7 388 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 FAM118AQ9NWS6 357 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 LAMP5Q9UJQ1 280 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 WASH3PC4AMC7 463 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 MAN2B1O00754 1011 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 VILLO15195 856 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 ADAMTS4O75173 837 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 EEDO75530 441 aaKnown RBP13.42□□□□□ -0.26
SNPH-201ENST00000381867 ITGBL1O95965 494 aaPredicted RBP13.42□□□□□ -0.26
SNPH-201ENST00000381867 ZNF8P17098 575 aaPredicted RBP13.42□□□□□ -0.26
SNPH-201ENST00000381867 MYF6P23409 242 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 GDI2P50395 445 aaKnown RBP13.42□□□□□ -0.26
SNPH-201ENST00000381867 ZNF763Q0D2J5 394 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 CCDC58Q4VC31 144 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 TMEM40Q8WWA1 233 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 HYLS1Q96M11 299 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 ARL6Q9H0F7 186 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 SMOXQ9NWM0 555 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 STUB1Q9UNE7 303 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 PCDHB14Q9Y5E9 798 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 ANKRD66B4E2M5 251 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 OAS1P00973 400 aaKnown RBP13.42□□□□□ -0.26
SNPH-201ENST00000381867 CYP17A1P05093 508 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 OR1E2P47887 323 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 HERV-K104P61576 105 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 LRRC37A5PQ49AS3 106 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 AADACL4Q5VUY2 407 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 PNCKQ6P2M8 343 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 ZNF767PQ75MW2 155 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 CAMKVQ8NCB2 501 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 OR10T2Q8NGX3 314 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 SLC5A11Q8WWX8 675 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 JPH3Q8WXH2 748 aaPredicted RBP13.42□□□□□ -0.26
SNPH-201ENST00000381867 PIP5K1AQ99755 562 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 DOHHQ9BU89 302 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 PPIL3Q9H2H8 161 aaKnown RBP13.42□□□□□ -0.26
SNPH-201ENST00000381867 CPNE5Q9HCH3 593 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 MYNNQ9NPC7 610 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 A0A1B0GVI7 797 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 ZNF840PA6NDX5 716 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 CENPBD1B2RD01 187 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 SCDO00767 359 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 GLT8D1Q68CQ7 371 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 SLC27A4Q6P1M0 643 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 AGTRAPQ6RW13 159 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 SYNPOQ8N3V7 929 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 LNX2Q8N448 690 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 MINDY1Q8N5J2 469 aa13.42□□□□□ -0.26
SNPH-201ENST00000381867 MFSD8Q8NHS3 518 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms