RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 KHDRBS3O75525 346 aaKnown RBP12.6□□□□□ -0.39
NPHP4-203ENST00000378169 JUNDP17535 347 aa12.6□□□□□ -0.39
NPHP4-203ENST00000378169 GJA4P35212 333 aa12.6□□□□□ -0.39
NPHP4-203ENST00000378169 CDK3Q00526 305 aa12.6□□□□□ -0.39
NPHP4-203ENST00000378169 TRAM2Q15035 370 aa12.6□□□□□ -0.39
NPHP4-203ENST00000378169 CDKL4Q5MAI5 379 aa12.6□□□□□ -0.39
NPHP4-203ENST00000378169 TMEM236Q5W0B7 351 aa12.6□□□□□ -0.39
NPHP4-203ENST00000378169 AGPAT4Q9NRZ5 378 aa12.6□□□□□ -0.39
NPHP4-203ENST00000378169 INTS6Q9UL03 887 aaKnown RBP12.6□□□□□ -0.39
NPHP4-203ENST00000378169 MGAT4BQ9UQ53 548 aa12.6□□□□□ -0.39
NPHP4-203ENST00000378169 C1orf226A1L170 272 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 BLOC1S5-TXNDC5H3BN57 136 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 ARNTLO00327 626 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 KRT33AO76009 404 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 PPP2R2BQ00005 443 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 CCSMST1Q4G0I0 132 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 TANGO2Q6ICL3 276 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 SLC9B2Q86UD5 537 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 MARCH9Q86YJ5 346 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 SPPL3Q8TCT6 385 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 ECHDC3Q96DC8 303 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 ANKRD60Q9BZ19 345 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 ANKRA2Q9H9E1 313 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 DMRT3Q9NQL9 472 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 GDE1Q9NZC3 331 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 APOBEC3BQ9UH17 382 aaKnown RBP12.59□□□□□ -0.39
NPHP4-203ENST00000378169 ASB1Q9Y576 335 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 C7orf72A4D263 438 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 C2orf74A8MZ97 194 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 RETP07949 1114 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 FHP07954 510 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 NUDT7P0C024 238 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 AGXTP21549 392 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 ACVR2AP27037 513 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 PMS2P3Q13401 168 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 PIN1Q13526 163 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-203ENST00000378169 TPRG1LQ5T0D9 272 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 FAM219BQ5XKK7 198 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 AKAP14Q86UN6 197 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 OR51G2Q8NGK0 314 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.59□□□□□ -0.39
NPHP4-203ENST00000378169 TSEN15Q8WW01 171 aaKnown RBP12.59□□□□□ -0.39
NPHP4-203ENST00000378169 RACGAP1Q9H0H5 632 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 KCNN2Q9H2S1 579 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 BRD7Q9NPI1 651 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 TMEM9Q9P0T7 183 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 CA5BQ9Y2D0 317 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 PCDHGA2Q9Y5H1 932 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 DLEC1Q9Y238 1755 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 KIAA1217Q5T5P2 1943 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 FRS3O43559 492 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 C1orf105O95561 183 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 ZDHHC11BP0C7U3 371 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 CELP19835 753 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 POLR2IP36954 125 aaKnown RBP12.59□□□□□ -0.39
NPHP4-203ENST00000378169 SUOXP51687 545 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 TPTEP56180 551 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 SLC3A1Q07837 685 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 TUBB3Q13509 450 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 TRNT1Q96Q11 434 aaKnown RBP12.59□□□□□ -0.39
NPHP4-203ENST00000378169 NDC1Q9BTX1 674 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 DCAF13Q9NV06 445 aaKnown RBP12.59□□□□□ -0.39
NPHP4-203ENST00000378169 CUEDC1Q9NWM3 386 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-203ENST00000378169 ANKMY1Q9P2S6 941 aa12.59□□□□□ -0.39
NPHP4-203ENST00000378169 CNOT11Q9UKZ1 510 aaKnown RBP12.59□□□□□ -0.39
NPHP4-203ENST00000378169 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.58□□□□□ -0.39
NPHP4-203ENST00000378169 H0YC42 278 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 H0YJX3 145 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 H7C0S8 307 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 GPR37L1O60883 481 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 RPP14O95059 124 aaKnown RBP12.58□□□□□ -0.39
NPHP4-203ENST00000378169 C7P10643 843 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 MYF6P23409 242 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 PRLHRP49683 370 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 CLCN2P51788 898 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 ABATP80404 500 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 FLYWCH1Q4VC44 716 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 ADGRD2Q7Z7M1 963 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 MOSPD2Q8NHP6 518 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 PPP1R14AQ96A00 147 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 KCTD7Q96MP8 289 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 PTCHD1Q96NR3 888 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 SLC6A16Q9GZN6 736 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 EXO5Q9H790 373 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 PREBQ9HCU5 417 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 ZSCAN32Q9NX65 697 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 ST14Q9Y5Y6 855 aa12.58□□□□□ -0.39
NPHP4-203ENST00000378169 A6NHS1 94 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 M0R129 80 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 UGDHO60701 494 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 SDC3O75056 442 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 CDRT1O95170 752 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF12P17014 697 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 CR2P20023 1033 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 STAT5AP42229 794 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 RORCP51449 518 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 ZNF404Q494X3 552 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 ARHGAP40Q5TG30 622 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 UGT2A3Q6UWM9 527 aa12.58□□□□□ -0.4
NPHP4-203ENST00000378169 LHFPL3Q86UP9 236 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms