RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ST14Q9Y5Y6 855 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 ZNF860A6NHJ4 632 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 NPIPB15A6NHN6 443 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-201ENST00000378156 CDC40O60508 579 aaKnown RBP eCLIP14.4□□□□□ -0.1
NPHP4-201ENST00000378156 KLK3P07288 261 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-201ENST00000378156 GGT1P19440 569 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 GNG2P59768 71 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 ID2Q02363 134 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 KCNC4Q03721 635 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 ADAM15Q13444 863 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 DECR1Q16698 335 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 SMPDL3BQ92485 455 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 NT5C3BQ969T7 300 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 TRMT2BQ96GJ1 504 aaKnown RBP14.4□□□□□ -0.1
NPHP4-201ENST00000378156 SLC17A9Q9BYT1 436 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 RDH8Q9NYR8 311 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 FAM170BA6NMN3 283 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 MAN2B1O00754 1011 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 SCDO00767 359 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 RCBTB2O95199 551 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 IL3P08700 152 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 PIM1P11309 404 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-201ENST00000378156 ACVR2AP27037 513 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 OC90Q02509 493 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-201ENST00000378156 CPXM2Q8N436 756 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 ZIC5Q96T25 663 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 IFT46Q9NQC8 304 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 UCKL1Q9NWZ5 548 aa14.4□□□□□ -0.1
NPHP4-201ENST00000378156 UQCRC2P22695 453 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 STOMP27105 288 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 ADRA1AP35348 466 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 SMSP52788 366 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 FAM189BP81408 668 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 PMS2P3Q13401 168 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 DNASE1L3Q13609 305 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 EFR3AQ14156 821 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 Q8N9G6 341 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF548Q8NEK5 533 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-201ENST00000378156 FAM129BQ96TA1 746 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 PHOX2BQ99453 314 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 RNF6Q9Y252 685 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 PCDHGB6Q9Y5F9 930 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 LOC285095A0A1B0GVY8 99 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 RENP00797 406 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 HLA-DPB1P04440 258 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 RGRP47804 291 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 DSC1Q08554 894 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF431Q8TF32 576 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-201ENST00000378156 HHIPL1Q96JK4 782 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 MND1Q9BWT6 205 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 MAP1BP46821 2468 aaKnown RBP14.39□□□□□ -0.11
NPHP4-201ENST00000378156 RPS17P08708 135 aaKnown RBP14.39□□□□□ -0.11
NPHP4-201ENST00000378156 KCNC1P48547 511 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 CLDN8P56748 225 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 RPP38P78345 283 aaKnown RBP14.39□□□□□ -0.11
NPHP4-201ENST00000378156 TMEM236Q5W0B7 351 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 NXPE4Q6UWF7 544 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 ASPGQ86U10 573 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 SLC37A3Q8NCC5 494 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 OR52E4Q8NGH9 312 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 F2RL3Q96RI0 385 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 SLC12A9Q9BXP2 914 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 SERINC1Q9NRX5 453 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 MARK1Q9P0L2 795 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 HPRP00739 348 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 ALDOCP09972 364 aaKnown RBP14.39□□□□□ -0.11
NPHP4-201ENST00000378156 GSTT2P0CG29 244 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 VSX2P58304 361 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-201ENST00000378156 NFE2L1Q14494 772 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 NRROSQ86YC3 692 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 ADGRG5Q8IZF4 528 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 CREB3L1Q96BA8 519 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 C8orf33Q9H7E9 229 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-201ENST00000378156 GDE1Q9NZC3 331 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 HCN4Q9Y3Q4 1203 aa14.39□□□□□ -0.11
NPHP4-201ENST00000378156 PCDHGA12O60330 932 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 RPS3P23396 243 aaKnown RBP eCLIP14.38□□□□□ -0.11
NPHP4-201ENST00000378156 S100A2P29034 98 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 GBX2P52951 348 aaPredicted RBP14.38□□□□□ -0.11
NPHP4-201ENST00000378156 PHC2Q8IXK0 858 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 ASCC1Q8N9N2 400 aaKnown RBP14.38□□□□□ -0.11
NPHP4-201ENST00000378156 HUS1BQ8NHY5 278 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 SNIP1Q8TAD8 396 aaKnown RBP14.38□□□□□ -0.11
NPHP4-201ENST00000378156 ITPKCQ96DU7 683 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 ATOH8Q96SQ7 321 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 HSPB11Q9Y547 144 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 OR6C74A6NCV1 312 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 SLC16A8O95907 504 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 GNAO1P09471 354 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 TXNL4AP83876 142 aaKnown RBP14.38□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF267Q14586 743 aaPredicted RBP14.38□□□□□ -0.11
NPHP4-201ENST00000378156 DEFB134Q4QY38 66 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 VTCN1Q7Z7D3 282 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 AMIGO1Q86WK6 493 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 C1orf216Q8TAB5 229 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 BIRC8Q96P09 236 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 IL21RQ9HBE5 538 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 OR1A2Q9Y585 309 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 COL4A1P02462 1669 aa14.38□□□□□ -0.11
NPHP4-201ENST00000378156 DLGAP1O14490 977 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms