RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 VPS4AQ9UN37 437 aa14.36□□□□□ -0.11
CCHCR1-201ENST00000376266 MAN2B2Q9Y2E5 1009 aa14.36□□□□□ -0.11
CCHCR1-201ENST00000376266 PCDHGB3Q9Y5G1 929 aa14.36□□□□□ -0.11
CCHCR1-201ENST00000376266 FAM170BA6NMN3 283 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 RFXANKO14593 260 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 TNFRSF21O75509 655 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 KLF8O95600 359 aaPredicted RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 GUCA1CO95843 209 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 IGSF6O95976 241 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 ALAS2P22557 587 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 ETV3P41162 512 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 USP39Q53GS9 565 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 PYDC2Q56P42 97 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 CCNJQ5T5M9 372 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 SAXO2Q658L1 398 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 LAMTOR1Q6IAA8 161 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 OR4F3Q6IEY1 312 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 AFTPHQ6ULP2 937 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 NLGN4YQ8NFZ3 816 aaPredicted RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 MARVELD3Q96A59 401 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 MTFMTQ96DP5 389 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 DIRAS2Q96HU8 199 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 GTPBP2Q9BX10 602 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 TBC1D17Q9HA65 648 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 LMAN1LQ9HAT1 526 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 ABCB9Q9NP78 766 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 GPRC5BQ9NZH0 403 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 FNDC3AQ9Y2H6 1198 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 PCDHGC4Q9Y5F7 938 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 ALG5Q9Y673 324 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 SLC35F4A4IF30 521 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 C1QCP02747 245 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 NTSR1P30989 418 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 RECQLP46063 649 aaPredicted RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 RPS14P62263 151 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 MADCAM1Q13477 382 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 ENPP2Q13822 863 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 C9orf64Q5T6V5 341 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 CBLL1Q75N03 491 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 SERPINA11Q86U17 422 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 VOPP1Q96AW1 172 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 TADA1Q96BN2 335 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 TRMT61AQ96FX7 289 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 C1QTNF7Q9BXJ2 289 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 ZDHHC6Q9H6R6 413 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 TRIM45Q9H8W5 580 aaPredicted RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 NLE1Q9NVX2 485 aaPredicted RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 EIF3KQ9UBQ5 218 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 MAPRE3Q9UPY8 281 aa14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 MRPS17Q9Y2R5 130 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-201ENST00000376266 EDDM13A0A1B0GTR0 161 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 PLD2O14939 933 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 TSPAN19P0C672 248 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 PTPN6P29350 595 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 CSTF2P33240 577 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 MXD1Q05195 221 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 FZD5Q13467 585 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 GLYR1Q49A26 553 aaPredicted RBP14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 LRRC66Q68CR7 880 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 NCEH1Q6PIU2 408 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 STK40Q8N2I9 435 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 SLC5A8Q8N695 610 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 LPCAT1Q8NF37 534 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 CDCA4Q9BXL8 241 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 CFAP20Q9Y6A4 193 aaKnown RBP14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 TNFRSF11BO00300 401 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 PLA2G10O15496 165 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 TRIM3O75382 744 aaPredicted RBP14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 KCNK5O95279 499 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 MRPS21P82921 87 aaKnown RBP14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 MRPL28Q13084 256 aaKnown RBP14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 GDPD1Q8N9F7 314 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 OR4M2Q8NGB6 313 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 TSSK3Q96PN8 268 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 PRSS16Q9NQE7 514 aa14.34□□□□□ -0.11
CCHCR1-201ENST00000376266 CLIC1O00299 241 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 NPC1O15118 1278 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 LRATO95237 230 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 POP4O95707 220 aaKnown RBP14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 CTSLP07711 333 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 ADRA2AP08913 450 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 ACADMP11310 421 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 ENGP17813 658 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 GABRB1P18505 474 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 ATF4P18848 351 aaPredicted RBP14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 GPC1P35052 558 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 CSNK1DP48730 415 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 CTSL3PQ5NE16 218 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 KIAA1211LQ6NV74 962 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 FAM124AQ86V42 546 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 OPALINQ96PE5 141 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 DPH2Q9BQC3 489 aaPredicted RBP14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 TAPBPLQ9BX59 468 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 RIMKLBQ9ULI2 386 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 PCDHGA2Q9Y5H1 932 aa14.33□□□□□ -0.11
CCHCR1-201ENST00000376266 IQCF5A8MTL0 148 aa14.33□□□□□ -0.12
CCHCR1-201ENST00000376266 I3L521 148 aa14.33□□□□□ -0.12
CCHCR1-201ENST00000376266 PSMA1P25786 263 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-201ENST00000376266 SOX3P41225 446 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms