RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MAU2Q9Y6X3 613 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 A0A1W2PPW3 197 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 YY2O15391 372 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 DUX1O43812 170 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 ADAMTS4O75173 837 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 TUBG1P23258 451 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 TCEAL1Q15170 157 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 PTCHD3Q3KNS1 767 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 CRB2Q5IJ48 1285 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF648Q5T619 568 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 MRPL43Q8N983 215 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF548Q8NEK5 533 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 CD300LFQ8TDQ1 290 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 RHBDF1Q96CC6 855 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC25A36Q96CQ1 311 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 NELL2Q99435 816 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 PCDHGA2Q9Y5H1 932 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 ITGB4P16144 1822 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 LCHNA4D1U4 455 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 LOC730098B7Z3J9 87 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 MANBAO00462 879 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 ACVR2AP27037 513 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC2A7Q6PXP3 512 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 P4HA3Q7Z4N8 544 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 HCFC1R1Q9NWW0 138 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF639Q9UID6 485 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLCO3A1Q9UIG8 710 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 HMX3A6NHT5 357 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 HOXD12P35452 270 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 LUMP51884 338 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 VAMP2P63027 116 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 SCAPQ12770 1279 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 DNASE1L3Q13609 305 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 DUOXA1Q1HG43 343 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 LRRC26Q2I0M4 334 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC37A3Q8NCC5 494 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 KCNJ9Q92806 393 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 RDH12Q96NR8 316 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF471Q9BX82 626 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 IL21RQ9HBE5 538 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 C14orf105Q9NVL8 296 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 SCML1Q9UN30 329 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 ENTPD1P49961 510 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 MEP1AQ16819 746 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 FAM111BQ6SJ93 734 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 SUSD1Q6UWL2 747 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 GALNTL5Q7Z4T8 443 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 LINC00471Q8N535 108 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 YIPF4Q9BSR8 244 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 POPDC3Q9HBV1 291 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 PCDHGA8Q9Y5G5 932 aa12.8□□□□□ -0.36
RAPGEF1-201ENST00000372189 TYROBPO43914 113 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 LILRB3O75022 631 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ITGA10O75578 1167 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 VAMP1P23763 118 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 TSPAN5P62079 268 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 HYAL2Q12891 473 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 C1orf61Q13536 156 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ANKFN1Q8N957 763 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 SEMA6DQ8NFY4 1073 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF431Q8TF32 576 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 SEC14L1Q92503 715 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC35A5Q9BS91 424 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 CD244Q9BZW8 370 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 CD93Q9NPY3 652 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 SDHAF3Q9NRP4 125 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 E9PI62 339 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 PENKP01210 267 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 C6P13671 934 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 HK1P19367 917 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ENDOUP21128 410 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 RAB8AP61006 207 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 NCEH1Q6PIU2 408 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZC3H14Q6PJT7 736 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 TICAM1Q8IUC6 712 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 OR4F6Q8NGB9 312 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 HLA-CQ95604 372 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 MRGPRX2Q96LB1 330 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ELOA3DA6NLF2 546 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 H0YAE9 185 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ALDH3B1P43353 468 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 CLDN10P78369 228 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ELOA3BQ3SY89 546 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 TIPARPQ7Z3E1 657 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ARHGAP12Q8IWW6 846 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMEM130Q8N3G9 435 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ELOA3Q8NG57 546 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 OR2L5Q8NG80 312 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 KIAA1191Q96A73 305 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZSWIM3Q96MP5 696 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 SPATA9Q9BWV2 254 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 GALPQ9UBC7 116 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 LHCGRP22888 699 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 AHCYP23526 432 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 FABP6P51161 128 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC3A1Q07837 685 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC36A4Q6YBV0 504 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 SSX7Q7RTT5 188 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms