RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 B4DGG1 531 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 E7EQ34 232 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 LMO7DNF2Z398 122 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 BTN3A3O00478 584 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 SDHDO14521 159 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 PPM1DO15297 605 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 HDAC3O15379 428 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 GPR42O15529 346 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 UNC5CO95185 931 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 MLYCDO95822 493 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 OTCP00480 354 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 TK1P04183 234 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 RPN2P04844 631 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 CAPN1P07384 714 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 CSF1P09603 554 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 TROVE2P10155 538 aaKnown RBP eCLIP3.39□□□□□ -1.87
MCF2-202ENST00000370573 GNSP15586 552 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 PSMB5P28074 263 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 HTR6P50406 440 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 CCNG1P51959 295 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 CTXN1P60606 82 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 HNRNPKP61978 463 aaKnown RBP eCLIP3.39□□□□□ -1.87
MCF2-202ENST00000370573 MEF2AQ02078 507 aaPredicted RBP3.39□□□□□ -1.87
MCF2-202ENST00000370573 CDC16Q13042 620 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 CHIT1Q13231 466 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 DOC2AQ14183 400 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 GPR18Q14330 331 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 KRT33BQ14525 404 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 ARHGAP19Q14CB8 494 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 ELOCQ15369 112 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 CCDC6Q16204 474 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 DUOXA1Q1HG43 343 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 HLA-BQ31612 363 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 MFSD4BQ5TF39 518 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 GKAP1Q5VSY0 366 aaPredicted RBP3.39□□□□□ -1.87
MCF2-202ENST00000370573 CAPN13Q6MZZ7 669 aaPredicted RBP3.39□□□□□ -1.87
MCF2-202ENST00000370573 SCIMPQ6UWF3 145 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 GKN2Q86XP6 184 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 CCDC28AQ8IWP9 274 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 ADGRF3Q8IZF5 1079 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 LGI4Q8N135 537 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 GALNT4Q8N4A0 578 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 ARL14Q8N4G2 192 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 DTX3Q8N9I9 347 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 L3MBTL4Q8NA19 623 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 OR4E2Q8NGC2 313 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 OR2A1Q8NGT9 310 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 OR2L8Q8NGY9 312 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 CEP70Q8NHQ1 597 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 FLVCR1-AS1Q8TAF5 88 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 HMGCLL1Q8TB92 370 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 METTL6Q8TCB7 284 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 ADAMTS15Q8TE58 950 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 SETD7Q8WTS6 366 aaKnown RBP3.39□□□□□ -1.87
MCF2-202ENST00000370573 LCN9Q8WX39 176 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 SMPDL3AQ92484 453 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 NEIL2Q969S2 332 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 ATP6V1E2Q96A05 226 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 CXorf40BQ96DE9 158 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 RADILQ96JH8 1075 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 PPP1R36Q96LQ0 422 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 OR52B2Q96RD2 323 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 NUF2Q9BZD4 464 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 NSRP1Q9H0G5 558 aaKnown RBP3.39□□□□□ -1.87
MCF2-202ENST00000370573 SPNS1Q9H2V7 528 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 CXorf56Q9H5V9 222 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 WDR55Q9H6Y2 383 aaPredicted RBP3.39□□□□□ -1.87
MCF2-202ENST00000370573 FARSBQ9NSD9 589 aaKnown RBP3.39□□□□□ -1.87
MCF2-202ENST00000370573 SLC23A1Q9UHI7 598 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 LNPEPQ9UIQ6 1025 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 ZNF490Q9ULM2 529 aaPredicted RBP3.39□□□□□ -1.87
MCF2-202ENST00000370573 BTRCQ9Y297 605 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 ARL2BPQ9Y2Y0 163 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 ANGPTL3Q9Y5C1 460 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 DNAJC15Q9Y5T4 150 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 HEBP2Q9Y5Z4 205 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 COLEC10Q9Y6Z7 277 aa3.39□□□□□ -1.87
MCF2-202ENST00000370573 GOLGA4Q13439 2230 aaKnown RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 DMDP11532 3685 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 USP34Q70CQ2 3546 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 PCDH15Q96QU1 1955 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KIR2DS5A0A0G2JLQ3 304 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 A0A0G2JNG1 304 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 GOLGA8QA0A0J9YX86 632 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 A0A1B0GTQ1 180 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 GOLGA8OA6NCC3 632 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 OR6C74A6NCV1 312 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 OR5K4A6NMS3 321 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 GOLGA8NF8WBI6 632 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KIR2DS3K7RE56 304 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 RAB27BO00194 218 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 MANBAO00462 879 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 DIAPH2O60879 1101 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ITGA10O75578 1167 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 RASSF9O75901 435 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KLHL18O94889 574 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CLDN9O95484 217 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 VIPP01282 170 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CFIP05156 583 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ANXA6P08133 673 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms