RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 KIAA1217Q5T5P2 1943 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 CXorf51AA0A1B0GTR3 108 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 HOXC11O43248 304 aaPredicted RBP6.72□□□□□ -1.33
RAB5B-201ENST00000360299 ZDHHC11BP0C7U3 371 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 BMP1P13497 986 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 ACADLP28330 430 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 MAZP56270 477 aaKnown RBP6.72□□□□□ -1.33
RAB5B-201ENST00000360299 DCDC1P59894 354 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 GK3PQ14409 553 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 PTGR1Q14914 329 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 TRAM2Q15035 370 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 ATP6AP1Q15904 470 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 TCTE1Q5JU00 501 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 DENND5AQ6IQ26 1287 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 PAMR1Q6UXH9 720 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 ZNF550Q7Z398 422 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 OR5M3Q8NGP4 307 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 NAT14Q8WUY8 206 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 SLC7A6OSQ96CW6 309 aaPredicted RBP6.72□□□□□ -1.33
RAB5B-201ENST00000360299 HSH2DQ96JZ2 352 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 SMAD5Q99717 465 aaKnown RBP6.72□□□□□ -1.33
RAB5B-201ENST00000360299 CTRCQ99895 268 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 RBCK1Q9BYM8 510 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 CHRDQ9H2X0 955 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 CENPFP49454 3210 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 ZNF99A8MXY4 864 aaPredicted RBP6.72□□□□□ -1.33
RAB5B-201ENST00000360299 MAGEB3O15480 346 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 RENP00797 406 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 HOXC12P31275 282 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 CCL11P51671 97 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 MYBPC1Q00872 1141 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 GPR68Q15743 365 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 SYT16Q17RD7 645 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 STPG1Q5TH74 334 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 ISLR2Q6UXK2 745 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 PDZD3Q86UT5 571 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 FRMD1Q8N878 549 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 OR5AK3PQ8NH89 298 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 STON2Q8WXE9 905 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 PTERQ96BW5 349 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 G6PC3Q9BUM1 346 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 EHD1Q9H4M9 534 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 RPF2Q9H7B2 306 aaKnown RBP6.72□□□□□ -1.33
RAB5B-201ENST00000360299 TVP23BQ9NYZ1 205 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 CNOT11Q9UKZ1 510 aaKnown RBP6.72□□□□□ -1.33
RAB5B-201ENST00000360299 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.72□□□□□ -1.33
RAB5B-201ENST00000360299 PTRH2Q9Y3E5 179 aaKnown RBP6.72□□□□□ -1.33
RAB5B-201ENST00000360299 PEX16Q9Y5Y5 336 aa6.72□□□□□ -1.33
RAB5B-201ENST00000360299 SPIN1Q9Y657 262 aaPredicted RBP6.72□□□□□ -1.33
RAB5B-201ENST00000360299 ARHGEF33A8MVX0 844 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 PRRT4C9JH25 899 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 DNAJB5O75953 348 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 SEMA3DO95025 777 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 SLC16A8O95907 504 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 SERPINA3P01011 423 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 PRLP01236 227 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 IGLV3-25P01717 112 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 SP9P0CG40 484 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 AOAHP28039 575 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 MCCD1P59942 119 aaPredicted RBP6.71□□□□□ -1.33
RAB5B-201ENST00000360299 FCHO2Q0JRZ9 810 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 ATP1A4Q13733 1029 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 LASP1Q14847 261 aaKnown RBP6.71□□□□□ -1.33
RAB5B-201ENST00000360299 ZNF789Q5FWF6 425 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 TNFAIP8L3Q5GJ75 292 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 USP30Q70CQ3 517 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 ZNF534Q76KX8 674 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 SLCO6A1Q86UG4 719 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 OR2L2Q8NH16 312 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 NXPE2Q96DL1 559 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 UBXN10Q96LJ8 280 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 FCRL4Q96PJ5 515 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 ATOH8Q96SQ7 321 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 PKP4Q99569 1192 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 DOHHQ9BU89 302 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 IFT27Q9BW83 186 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 COL25A1Q9BXS0 654 aaPredicted RBP6.71□□□□□ -1.33
RAB5B-201ENST00000360299 MED31Q9Y3C7 131 aa6.71□□□□□ -1.33
RAB5B-201ENST00000360299 KIR2DS5A0A0G2JLQ3 304 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 A0A0G2JNG1 304 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 PRSS38A1L453 326 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 KIR2DS3K7RE56 304 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 AIREO43918 545 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 CBFA2T3O75081 653 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 NELFEP18615 380 aaKnown RBP6.71□□□□□ -1.34
RAB5B-201ENST00000360299 CXCR1P25024 350 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 SDC2P34741 201 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 GGT5P36269 586 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 PRLHRP49683 370 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 RAB15P59190 212 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 LSM3P62310 102 aaKnown RBP6.71□□□□□ -1.34
RAB5B-201ENST00000360299 GABREP78334 506 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 NKX3-2P78367 333 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 NFATC4Q14934 902 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 KIR2DS3Q14952 304 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 KIR2DS5Q14953 304 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 DEFB110Q30KQ9 67 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 LCN8Q6JVE9 175 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 KCTD8Q6ZWB6 473 aa6.71□□□□□ -1.34
RAB5B-201ENST00000360299 PDSS2Q86YH6 399 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms