RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PARGQ86W56 976 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ZC3H7AQ8IWR0 971 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 RBM12BQ8IXT5 1001 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 GJD3Q8N144 294 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 METTL25Q8N6Q8 603 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 HORMAD2Q8N7B1 307 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ARL10Q8N8L6 244 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CADM4Q8NFZ8 388 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 OR4C15Q8NGM1 316 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 OR5AK3PQ8NH89 298 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SUN3Q8TAQ9 357 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 BAHD1Q8TBE0 780 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 MIPOL1Q8TD10 442 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SFXN5Q8TD22 340 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 UTP15Q8TED0 518 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SLC37A2Q8TED4 501 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 FBLIM1Q8WUP2 373 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 APOBEC4Q8WW27 367 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CYGBQ8WWM9 190 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 PATE1Q8WXA2 126 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 KLHL6Q8WZ60 621 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 RSC1A1Q92681 617 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 HLA-CQ95604 372 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 EXOSC8Q96B26 276 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SDCCAG3Q96C92 435 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 KLHDC7BQ96G42 594 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 RMND5BQ96G75 393 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 C10orf90Q96M02 699 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF681Q96N22 645 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SLC6A18Q96N87 628 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 NELL2Q99435 816 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 EPYCQ99645 322 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 BARD1Q99728 777 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 MACROD1Q9BQ69 325 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 TMEM121BQ9BXQ6 578 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 AMBRA1Q9C0C7 1298 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ROGDIQ9GZN7 287 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 TOR3AQ9H497 397 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SERHL2Q9H4I8 314 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 SOX17Q9H6I2 414 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CLK4Q9HAZ1 481 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 THSD1Q9NS62 852 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 EVA1BQ9NVM1 165 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 FAM118AQ9NWS6 357 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 THUMPD1Q9NXG2 353 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 TUBA8Q9NY65 449 aaPredicted RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 NDUFAF4Q9P032 175 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 NDUFA13Q9P0J0 144 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 KCMF1Q9P0J7 381 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 C5AR2Q9P296 337 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 RALYQ9UKM9 306 aaKnown RBP6.55□□□□□ -1.36
TRIM55-203ENST00000350034 CA14Q9ULX7 337 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ANGPT4Q9Y264 503 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF451Q9Y4E5 1061 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 MAP4K5Q9Y4K4 846 aa6.55□□□□□ -1.36
TRIM55-203ENST00000350034 PLXND1Q9Y4D7 1925 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CROCCQ5TZA2 2017 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 A0A0J9YY10 115 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 PRAMEF27A3QJZ7 478 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 FAM170BA6NMN3 283 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 WASHC1A8K0Z3 465 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 VGLL3A8MV65 326 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 C2orf74A8MZ97 194 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 hCG_2039718K7EN88 272 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 P2RX6O15547 441 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 NDUFS2O75306 463 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 E2F6O75461 281 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 MFN2O95140 757 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 BMP10O95393 424 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CLIC3O95833 236 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 C9P02748 559 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 STATHP02808 62 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CSF2P04141 144 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 IL9P15248 144 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 NME1P15531 152 aaKnown RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 POLR2CP19387 275 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CSNK2A2P19784 350 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 MAGP20916 626 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CD247P20963 164 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 PRKACGP22612 351 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CERS1P27544 350 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 AQP1P29972 269 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 NTSP30990 170 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CCT3P49368 545 aaKnown RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 PRIM2P49643 509 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 DAPP51397 102 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 BLKP51451 505 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 HMGA2P52926 109 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CASP9P55211 416 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 RAB8AP61006 207 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 BTN3A2P78410 334 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 DUSP2Q05923 314 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 RGS1Q08116 209 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 HSPB3Q12988 150 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 KCNAB2Q13303 367 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 IL18R1Q13478 541 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 PLCL1Q15111 1095 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 TCEA2Q15560 299 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 ST3GAL2Q16842 350 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 PUS10Q3MIT2 529 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms