RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 COL1A1P02452 1464 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 BBIP1A8MTZ0 92 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 ARHGEF33A8MVX0 844 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 CENPBD1B2RD01 187 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 E7ESA3 106 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 TERTO14746 1132 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 RAD51BO15315 384 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 MED26O95402 600 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 TFAP2AP05549 437 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 S100A6P06703 90 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 MSH3P20585 1137 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 SLC6A2P23975 617 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 CCND2P30279 289 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 CCT8P50990 548 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 GTF2BQ00403 316 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 LGALS3BPQ08380 585 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 RFTN1Q14699 578 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 SMTNL2Q2TAL5 461 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 UBAP2Q5T6F2 1119 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 TIFABQ6ZNK6 161 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 ARHGAP12Q8IWW6 846 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 CDH26Q8IXH8 852 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 C8orf59Q8N0T1 100 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 SLC5A8Q8N695 610 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 OR5T1Q8NG75 326 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 KAT2AQ92830 837 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 MRGPRX3Q96LB0 322 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 GLT1D1Q96MS3 346 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 EBNA1BP2Q99848 306 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 RHNO1Q9BSD3 238 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 RMND5AQ9H871 391 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 SOHLH2Q9NX45 425 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 NAALAD2Q9Y3Q0 740 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 ASTN2O75129 1339 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 PLCH1Q4KWH8 1693 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 TCRBV5S2A0A599 114 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 NOTOA8MTQ0 251 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 K7EPI3 171 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 PAPSS1O43252 624 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 ZIC3O60481 467 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 LYPLA1O75608 230 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 UNGP13051 313 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 HPGDP15428 266 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 BTF3P20290 206 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 MC3RP41968 323 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 CDKN2BP42772 138 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 INHBCP55103 352 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 MS4A2Q01362 244 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 FASTKQ14296 549 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 STXBP2Q15833 593 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 DCAF6Q58WW2 860 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 DHRS4L2Q6PKH6 230 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 DGLUCYQ7Z3D6 616 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 ZER1Q7Z7L7 766 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 ZNF761Q86XN6 746 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 CBR4Q8N4T8 237 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 RNF149Q8NC42 400 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 OR13A1Q8NGR1 328 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 OR2T34Q8NGX1 318 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 OR2T3Q8NH03 318 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 HSD17B8Q92506 261 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 FAM46BQ96A09 425 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 PPP1R36Q96LQ0 422 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 AGAP3Q96P47 875 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 OMDQ99983 421 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 ZNF559Q9BR84 538 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 PI4K2AQ9BTU6 479 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 NOL11Q9H8H0 719 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 EVA1AQ9H8M9 152 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 TRPV5Q9NQA5 729 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 FAM49BQ9NUQ9 324 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 PARPBPQ9NWS1 579 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 FZD10Q9ULW2 581 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 PLIN4Q96Q06 1357 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 MYOCOSA0A1B0GUC4 107 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 RNASET2O00584 256 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 ZMPSTE24O75844 475 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 TSPAN15O95858 294 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 ITGA5P08648 1049 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 SMIM18P0DKX4 95 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 SLC5A2P31639 672 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 UGT2B10P36537 528 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 CDKL1Q00532 357 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 MSLNQ13421 630 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 CCDC60Q8IWA6 550 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 C1orf52Q8N6N3 182 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 IL17RCQ8NAC3 791 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 SETD9Q8NE22 299 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 SLC35B2Q8TB61 432 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 CHPT1Q8WUD6 406 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 SMPDL3BQ92485 455 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 RORBQ92753 470 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 APH1AQ96BI3 265 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 TRIM43Q96BQ3 446 aaPredicted RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 PARK7Q99497 189 aaKnown RBP5.7□□□□□ -1.5
RFC1-201ENST00000349703 ZYG11BQ9C0D3 744 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 SPATC1LQ9H0A9 340 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 SGK2Q9HBY8 427 aa5.7□□□□□ -1.5
RFC1-201ENST00000349703 WDR6Q9NNW5 1121 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms