RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 APOOQ9BUR5 198 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 AIG1Q9NVV5 245 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 FLRT1Q9NZU1 646 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 SLAMF8Q9P0V8 285 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 PGAP2Q9UHJ9 254 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 SH3BGRL2Q9UJC5 107 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 K7ERQ8 282 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 BTN3A3O00478 584 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 FBP2O00757 339 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 PGRMC2O15173 223 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 IDH3BO43837 385 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 CPNE6O95741 557 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 CHRM1P11229 460 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF12P17014 697 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 HOXA9P31269 272 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 VLDLRP98155 873 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 MALLQ13021 153 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF234Q14588 700 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 GTDC1Q4AE62 458 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 TMEM201Q5SNT2 666 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 FOXB2Q5VYV0 432 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF773Q6PK81 442 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 FAM86B1Q8N7N1 296 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 IP6K3Q96PC2 410 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 EDEM2Q9BV94 578 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 IFT27Q9BW83 186 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 CDH20Q9HBT6 801 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 SACM1LQ9NTJ5 587 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 MBLAC1A4D2B0 266 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 TGFB1P01137 390 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 PGCP20142 388 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 CD72P21854 359 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ETV3P41162 512 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ATP4BP51164 291 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 MZT1Q08AG7 82 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 NSDHLQ15738 373 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 DDI2Q5TDH0 399 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ANKRD33Q7Z3H0 272 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 GPR137CQ8N3F9 429 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 CPXM2Q8N436 756 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 KAT8Q9H7Z6 458 aaKnown RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 FZD3Q9NPG1 666 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 FZD4Q9ULV1 537 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 TMED5Q9Y3A6 229 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 LAMB2P55268 1798 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 TACSTD2P09758 323 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ALDOCP09972 364 aaKnown RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ITGB7P26010 798 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 CLRN1P58418 232 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 POU6F2P78424 691 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 EMX2Q04743 252 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 PTCHD3Q3KNS1 767 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 RBM48Q5RL73 367 aaKnown RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 KANK2Q63ZY3 851 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 FRG2Q64ET8 278 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 TNFAIP8L2Q6P589 184 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 UNC5DQ6UXZ4 953 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 FRG2BQ96QU4 278 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 BOCQ9BWV1 1114 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 RAB9BQ9NP90 201 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 BOKQ9UMX3 212 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 MRPS7Q9Y2R9 242 aaKnown RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 M0QZQ0 153 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 PLOD2O00469 737 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 MPC1LP0DKB6 136 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 STK19P49842 368 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 INHBCP55103 352 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 DLX2Q07687 328 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF648Q5T619 568 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ZER1Q7Z7L7 766 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 OR2L5Q8NG80 312 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 AP3S1Q92572 193 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 HDHD5Q9BXW7 423 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 USP3Q9Y6I4 520 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 NSG1A0A0A6YYJ2 146 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 AQP9O43315 295 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 STATHP02808 62 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 TFAP2AP05549 437 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 ACVR2AP27037 513 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 KCNC1P48547 511 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 FAM131AQ6UXB0 335 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 TMEM25Q86YD3 366 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 DNAAF1Q8NEP3 725 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 FUBP1Q96AE4 644 aaKnown RBP10.42□□□□□ -0.74
CLCN6-202ENST00000346436 C1GALT1C1Q96EU7 318 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 IL4I1Q96RQ9 567 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 AASSQ9UDR5 926 aa10.42□□□□□ -0.74
CLCN6-202ENST00000346436 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 CCNKO75909 580 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 GLSO94925 669 aaPredicted RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 OR1E2P47887 323 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 RAB2AP61019 212 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 FAM189BP81408 668 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 CDKN3Q16667 212 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 OR2T5Q6IEZ7 315 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 SHQ1Q6PI26 577 aaKnown RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 SH2D5Q6ZV89 423 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 MINDY1Q8N5J2 469 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 C1orf52Q8N6N3 182 aaKnown RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 OR2T29Q8NH02 315 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms