RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 STX4Q12846 297 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 NPRL3Q12980 569 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 CTU2Q2VPK5 515 aaKnown RBP12.66□□□□□ -0.38
CASC4-202ENST00000345795 DDI2Q5TDH0 399 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 ATG9BQ674R7 924 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 RNF168Q8IYW5 571 aaPredicted RBP12.66□□□□□ -0.38
CASC4-202ENST00000345795 OR5T3Q8NGG3 340 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 OR9Q1Q8NGQ5 310 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 NCSTNQ92542 709 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 VMP1Q96GC9 406 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 GAL3ST1Q99999 423 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 NUAK2Q9H093 628 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 DDX28Q9NUL7 540 aaKnown RBP12.66□□□□□ -0.38
CASC4-202ENST00000345795 TBC1D29Q9UFV1 150 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 TMED5Q9Y3A6 229 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 PCDHGB3Q9Y5G1 929 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 SLC5A10A0PJK1 596 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 MYL12BO14950 172 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 TMPRSS11DO60235 418 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 KLK8O60259 260 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 SRPRAP08240 638 aaKnown RBP12.66□□□□□ -0.38
CASC4-202ENST00000345795 FPR1P21462 350 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 PCDH1Q08174 1060 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 KIAA0040Q15053 153 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 ZBED5Q49AG3 693 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 TECPR1Q7Z6L1 1165 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 LEMD2Q8NC56 503 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 MCFD2Q8NI22 146 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 STARD8Q92502 1023 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 ZNF607Q96SK3 696 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 KLHL28Q9NXS3 571 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 A0A1W2PPK0 400 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 HAT1O14929 419 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 ANKRD28O15084 1053 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 AIREO43918 545 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 KDM1AO60341 852 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 SNX4O95219 450 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 RPS21P63220 83 aaKnown RBP12.66□□□□□ -0.38
CASC4-202ENST00000345795 RGS1Q08116 209 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 LPAL2Q16609 132 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 ZNF438Q7Z4V0 828 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 QRFPRQ96P65 431 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 DOHHQ9BU89 302 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 TCEAL2Q9H3H9 227 aaPredicted RBP12.66□□□□□ -0.38
CASC4-202ENST00000345795 ZNF696Q9H7X3 374 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 SNTG1Q9NSN8 517 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 ATG4BQ9Y4P1 393 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 CEPT1Q9Y6K0 416 aa12.66□□□□□ -0.38
CASC4-202ENST00000345795 CHD5Q8TDI0 1954 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 PRSS23O95084 383 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 TRPC1P48995 793 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 XKP51811 444 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 FBXW4P57775 412 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 SHC2P98077 582 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 ST3GAL4Q11206 333 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 DPY19L1Q2PZI1 675 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 ZNF311Q5JNZ3 666 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 AMIGO1Q86WK6 493 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 OR2L2Q8NH16 312 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 OR51A7Q8NH64 312 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 NDNFQ8TB73 568 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 SH3YL1Q96HL8 342 aaPredicted RBP12.65□□□□□ -0.38
CASC4-202ENST00000345795 NPLQ9BXD5 320 aaPredicted RBP12.65□□□□□ -0.38
CASC4-202ENST00000345795 TRNAU1APQ9NX07 287 aaKnown RBP12.65□□□□□ -0.38
CASC4-202ENST00000345795 STOML2Q9UJZ1 356 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 FAM183AA6NL82 134 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 H3BMQ9 156 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 ADAMDEC1O15204 470 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 ACOX3O15254 700 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 PSIP1O75475 530 aaKnown RBP12.65□□□□□ -0.38
CASC4-202ENST00000345795 MRPL3P09001 348 aaKnown RBP12.65□□□□□ -0.38
CASC4-202ENST00000345795 OPRD1P41143 372 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 SLC6A12P48065 614 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 RAB28P51157 221 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 EXOSC7Q15024 291 aaKnown RBP12.65□□□□□ -0.38
CASC4-202ENST00000345795 CPZQ66K79 652 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 ERICH5Q6P6B1 374 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 COG8Q96MW5 612 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 SLC2A11Q9BYW1 496 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 RWDD3Q9Y3V2 267 aa12.65□□□□□ -0.38
CASC4-202ENST00000345795 AP3D1O14617 1153 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 ZNF888P0CJ79 500 aaPredicted RBP12.65□□□□□ -0.39
CASC4-202ENST00000345795 LAMP2P13473 410 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 CNR2P34972 360 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 TGM3Q08188 693 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 ZNF155Q12901 538 aaPredicted RBP12.65□□□□□ -0.39
CASC4-202ENST00000345795 ILF2Q12905 390 aaKnown RBP12.65□□□□□ -0.39
CASC4-202ENST00000345795 TIGD6Q17RP2 521 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 ODF4Q2M2E3 257 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 Q6ZSR6 202 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 LHFPL3Q86UP9 236 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 DPP10Q8N608 796 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 CHDHQ8NE62 594 aaPredicted RBP12.65□□□□□ -0.39
CASC4-202ENST00000345795 Q96MT0 163 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 SERHLQ9NQF3 203 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 SPATA7Q9P0W8 599 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 HSFX1Q9UBD0 423 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 COLEC10Q9Y6Z7 277 aa12.65□□□□□ -0.39
CASC4-202ENST00000345795 NOTCH4Q99466 2003 aa12.64□□□□□ -0.39
CASC4-202ENST00000345795 TCRBV5S2A0A599 114 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms