RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 ATG4BQ9Y4P1 393 aa16.85■□□□□ 0.29
USF2-202ENST00000343550 SPACA6W5XKT8 324 aa16.85■□□□□ 0.29
USF2-202ENST00000343550 TMPRSS11DO60235 418 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 GBAP04062 536 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 KLK1P06870 262 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 HMOX2P30519 316 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 TNFSF10P50591 281 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 FOXA1P55317 472 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 HNRNPH2P55795 449 aaKnown RBP16.84■□□□□ 0.29
USF2-202ENST00000343550 AP2B1P63010 937 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 EXT1Q16394 746 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 NUDT13Q86X67 352 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 SIRT6Q8N6T7 355 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 PGM2Q96G03 612 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 HBEGFQ99075 208 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 CENPHQ9H3R5 247 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 OLAHQ9NV23 265 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 NMRK1Q9NWW6 199 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 VPS29Q9UBQ0 182 aa16.84■□□□□ 0.29
USF2-202ENST00000343550 TRAV17A0A0B4J275 112 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 A8MUA0 341 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 H3BQF6 201 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 CTIFO43310 598 aaKnown RBP16.83■□□□□ 0.28
USF2-202ENST00000343550 LDB3O75112 727 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 FAM58BPP0C7Q3 252 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 HSD3B1P14060 373 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 HSD3B2P26439 372 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 ETV4P43268 484 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 PER3P56645 1201 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 ZNF33BQ06732 778 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 TBL3Q12788 808 aaKnown RBP16.83■□□□□ 0.28
USF2-202ENST00000343550 C18orf63Q68DL7 685 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 H3F3CQ6NXT2 135 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 CYP20A1Q6UW02 462 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 CLNKQ7Z7G1 428 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 NFAM1Q8NET5 270 aaPredicted RBP16.83■□□□□ 0.28
USF2-202ENST00000343550 ANKRD9Q96BM1 317 aaPredicted RBP16.83■□□□□ 0.28
USF2-202ENST00000343550 MECRQ9BV79 373 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 ALOXE3Q9BYJ1 711 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 RPF2Q9H7B2 306 aaKnown RBP16.83■□□□□ 0.28
USF2-202ENST00000343550 SSU72Q9NP77 194 aaKnown RBP16.83■□□□□ 0.28
USF2-202ENST00000343550 TNFRSF12AQ9NP84 129 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 MMP25Q9NPA2 562 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 LYARQ9NX58 379 aaKnown RBP16.83■□□□□ 0.28
USF2-202ENST00000343550 PHF11Q9UIL8 331 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 ADAM29Q9UKF5 820 aa16.83■□□□□ 0.28
USF2-202ENST00000343550 A0A1W2PR48 441 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 SERTM1A2A2V5 107 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 CHN1P15882 459 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 TPP2P29144 1249 aaPredicted RBP16.82■□□□□ 0.28
USF2-202ENST00000343550 TLX1P31314 330 aaPredicted RBP16.82■□□□□ 0.28
USF2-202ENST00000343550 HTR6P50406 440 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 SLC26A5P58743 744 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 GALNT1Q10472 559 aaPredicted RBP16.82■□□□□ 0.28
USF2-202ENST00000343550 ASPHQ12797 758 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 STX4Q12846 297 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 CSTF3Q12996 717 aaKnown RBP16.82■□□□□ 0.28
USF2-202ENST00000343550 ZNF324BQ6AW86 544 aaPredicted RBP16.82■□□□□ 0.28
USF2-202ENST00000343550 PAGE2Q7Z2X7 111 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 GBP7Q8N8V2 638 aaPredicted RBP16.82■□□□□ 0.28
USF2-202ENST00000343550 CHTF18Q8WVB6 975 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 TANKQ92844 425 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 SHCBP1LQ9BZQ2 653 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 PNO1Q9NRX1 252 aaKnown RBP16.82■□□□□ 0.28
USF2-202ENST00000343550 VTI1BQ9UEU0 232 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 CRYBG3Q68DQ2 2970 aa16.82■□□□□ 0.28
USF2-202ENST00000343550 MYOCOSA0A1B0GUC4 107 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 SAGE2PA6NJ88 616 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 WASHC1A8K0Z3 465 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 UQCRHP07919 91 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 STSP08842 583 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 SERPINB3P29508 390 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 PPP2R1BP30154 601 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 TNFRSF17Q02223 184 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 CCNYL2Q5T2Q4 361 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 COMMD6Q7Z4G1 85 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 OR4N5Q8IXE1 308 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 ELP5Q8TE02 316 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 TAAR6Q96RI8 345 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 TRMOQ9BU70 441 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 ACPTQ9BZG2 426 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.81■□□□□ 0.281e-6■■■■□ 22.5
USF2-202ENST00000343550 ACTL7BQ9Y614 415 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 CELSR2Q9HCU4 2923 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 CACNA1DQ01668 2161 aa16.81■□□□□ 0.28
USF2-202ENST00000343550 A8MUI8 341 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 PRKRAO75569 313 aaKnown RBP16.8■□□□□ 0.28
USF2-202ENST00000343550 WDPCPO95876 746 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 F10P00742 488 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 BPGMP07738 259 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 BUD31P41223 144 aaPredicted RBP16.8■□□□□ 0.28
USF2-202ENST00000343550 SERTAD2Q14140 314 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 TERF2Q15554 542 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 INAQ16352 499 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 SCIMPQ6UWF3 145 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 UCN3Q969E3 161 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 KCNK13Q9HB14 408 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 ADAP2Q9NPF8 381 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 STMN3Q9NZ72 180 aa16.8■□□□□ 0.28
USF2-202ENST00000343550 PPIEQ9UNP9 301 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms