RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 NDUFB11Q9NX14 153 aa14.66□□□□□ -0.06
LIMK2-203ENST00000340552 GPRC5BQ9NZH0 403 aa14.66□□□□□ -0.06
LIMK2-203ENST00000340552 PRELID3BQ9Y3B1 194 aa14.66□□□□□ -0.06
LIMK2-203ENST00000340552 PCDHGB7Q9Y5F8 929 aa14.66□□□□□ -0.06
LIMK2-203ENST00000340552 PRAMEF33A0A0G2JMD5 474 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 CBX4O00257 560 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 PRAMEF10O60809 474 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 FGF18O76093 207 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 PRAMEF1O95521 474 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 HBQ1P09105 142 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 SGSHP51688 502 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 C2orf80Q0P641 193 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 PPIGQ13427 754 aaKnown RBP eCLIP14.65□□□□□ -0.061e-7■■□□□ 13.6
LIMK2-203ENST00000340552 ZNF235Q14590 738 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 SPHARQ15513 63 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 VMACQ2NL98 169 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 LIPKQ5VXJ0 399 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 C22orf42Q6IC83 251 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 TSEN54Q7Z6J9 526 aaKnown RBP14.65□□□□□ -0.06
LIMK2-203ENST00000340552 PDZD3Q86UT5 571 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 OR10G2Q8NGC3 310 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 P2RY13Q9BPV8 354 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 DPH2Q9BQC3 489 aaPredicted RBP14.65□□□□□ -0.06
LIMK2-203ENST00000340552 TMEM43Q9BTV4 400 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 GSX2Q9BZM3 304 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 ANKRA2Q9H9E1 313 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 PDFQ9HBH1 243 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 ZNF334Q9HCZ1 680 aaPredicted RBP14.65□□□□□ -0.06
LIMK2-203ENST00000340552 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.65□□□□□ -0.06
LIMK2-203ENST00000340552 PCDHGB3Q9Y5G1 929 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 SLC22A23A1A5C7 686 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 H3BNC9 293 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 TSPAN3O60637 253 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 CLDN11O75508 207 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 CCNB2O95067 398 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 CHRM5P08912 532 aaPredicted RBP14.65□□□□□ -0.06
LIMK2-203ENST00000340552 HK1P19367 917 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 HOXD9P28356 352 aaPredicted RBP14.65□□□□□ -0.06
LIMK2-203ENST00000340552 CAV3P56539 151 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 ERVFC1P60507 584 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 POLR2GP62487 172 aaKnown RBP eCLIP14.65□□□□□ -0.06
LIMK2-203ENST00000340552 PUDPQ08623 228 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 USP39Q53GS9 565 aaKnown RBP14.65□□□□□ -0.06
LIMK2-203ENST00000340552 ADGRF1Q5T601 910 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 RETSATQ6NUM9 610 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 TTC16Q8NEE8 873 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 OR9Q1Q8NGQ5 310 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 CHTF18Q8WVB6 975 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 CREB3L1Q96BA8 519 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 KCNJ15Q99712 375 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 SEMA3CQ99985 751 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 SOSTQ9BQB4 213 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 SPON2Q9BUD6 331 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 POLR1EQ9GZS1 481 aaKnown RBP14.65□□□□□ -0.06
LIMK2-203ENST00000340552 LDAHQ9H6V9 325 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 IL23AQ9NPF7 189 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 SDHAF2Q9NX18 166 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 COMMD3Q9UBI1 195 aa14.65□□□□□ -0.06
LIMK2-203ENST00000340552 LILRB3O75022 631 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 KCNK5O95279 499 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 SDC2P34741 201 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 CYP4F8P98187 520 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 SF3A2Q15428 464 aaKnown RBP14.64□□□□□ -0.07
LIMK2-203ENST00000340552 BCL2L15Q5TBC7 163 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 KIAA0907Q7Z7F0 614 aaPredicted RBP14.64□□□□□ -0.07
LIMK2-203ENST00000340552 RBFAQ8N0V3 343 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 OR52J3Q8NH60 311 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 FOLH1BQ9HBA9 442 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 EMC7Q9NPA0 242 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 PCDHB16Q9NRJ7 776 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 FAM8A1Q9UBU6 413 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 TNFRSF11BO00300 401 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 GJB3O75712 270 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 PAHP00439 452 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 F11P03951 625 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 PIRTP0C851 137 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 CXCL3P19876 107 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 F8A1P23610 371 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 SMSP52788 366 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 KCNJ10P78508 379 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 ACVR1Q04771 509 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 SERPINA11Q86U17 422 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 TRIM69Q86WT6 500 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 PTOV1Q86YD1 416 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 BBS7Q8IWZ6 715 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 SRFBP1Q8NEF9 429 aaKnown RBP14.64□□□□□ -0.07
LIMK2-203ENST00000340552 OR4L1Q8NH43 312 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 EEF1AKMT1Q8WVE0 214 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 TMEM203Q969S6 136 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 SLC22A12Q96S37 553 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 WACQ9BTA9 647 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 ZBP1Q9H171 429 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 POFUT2Q9Y2G5 429 aa14.64□□□□□ -0.07
LIMK2-203ENST00000340552 PLXNA4Q9HCM2 1894 aa14.63□□□□□ -0.07
LIMK2-203ENST00000340552 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.63□□□□□ -0.07
LIMK2-203ENST00000340552 HRGP04196 525 aa14.63□□□□□ -0.07
LIMK2-203ENST00000340552 RHOCP08134 193 aa14.63□□□□□ -0.07
LIMK2-203ENST00000340552 ATXN1LP0C7T5 689 aaKnown RBP14.63□□□□□ -0.07
LIMK2-203ENST00000340552 RAB3AP20336 220 aa14.63□□□□□ -0.07
LIMK2-203ENST00000340552 S100A3P33764 101 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms