RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 SLC27A6Q9Y2P4 619 aa10.28□□□□□ -0.76
RTN3-201ENST00000338850 PCDHGA3Q9Y5H0 932 aa10.28□□□□□ -0.76
RTN3-201ENST00000338850 PLXND1Q9Y4D7 1925 aa10.28□□□□□ -0.76
RTN3-201ENST00000338850 DSPPQ9NZW4 1301 aa10.28□□□□□ -0.76
RTN3-201ENST00000338850 GON4LQ3T8J9 2241 aa10.27□□□□□ -0.76
RTN3-201ENST00000338850 FADS2P1A8MWK0 482 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 EFCAB9A8MZ26 197 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 YY2O15391 372 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 GCM2O75603 506 aaPredicted RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 CPSF4O95639 269 aaKnown RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 OXSR1O95747 527 aaPredicted RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 FADS2O95864 444 aaKnown RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 PTTG1O95997 202 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 ADAP00813 363 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 RPLP0P05388 317 aaKnown RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 TFPTP0C1Z6 253 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 TIMP2P16035 220 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 CD36P16671 472 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 ZNF8P17098 575 aaPredicted RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 RHCEP18577 417 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 ENDOUP21128 410 aaKnown RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 CBLP22681 906 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 HOXD12P35452 270 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 NOVA1P51513 510 aaKnown RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 RPL6Q02878 288 aaKnown RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 PIGFQ07326 219 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 NAE1Q13564 534 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 ATP1A4Q13733 1029 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 INAQ16352 499 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 TMEM201Q5SNT2 666 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 HIST2H2AA3Q6FI13 130 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 LCTLQ6UWM7 567 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 SLC36A4Q6YBV0 504 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 GDPGP1Q6ZNW5 385 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 PLD3Q8IV08 490 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 LRRC56Q8IYG6 542 aaPredicted RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 OR4A15Q8NGL6 344 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 HUS1BQ8NHY5 278 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 PSMA8Q8TAA3 256 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 NDNFQ8TB73 568 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 SNRNP27Q8WVK2 155 aaKnown RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 SKA2Q8WVK7 121 aaPredicted RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 EFHD2Q96C19 240 aaPredicted RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 ERLEC1Q96DZ1 483 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 MRGPRX3Q96LB0 322 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 DHRS1Q96LJ7 313 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 PKP4Q99569 1192 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 ATG10Q9H0Y0 220 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 DCSTAMPQ9H295 470 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 NT5DC2Q9H857 520 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 PCDH12Q9NPG4 1184 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 SELENONQ9NZV5 590 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 PILRBQ9UKJ0 227 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 EXO1Q9UQ84 846 aaKnown RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 BTBD3Q9Y2F9 522 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 TDRKHQ9Y2W6 561 aaKnown RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 DYRK1BQ9Y463 629 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 DGKBQ9Y6T7 804 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 ENPP4Q9Y6X5 453 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 NUP214P35658 2090 aaPredicted RBP10.27□□□□□ -0.77
RTN3-201ENST00000338850 LAMA1P25391 3075 aa10.27□□□□□ -0.77
RTN3-201ENST00000338850 A0A075B6Q4 140 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 PNMA8CA0A1B0GUJ8 204 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 M0R082 166 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 TSPAN6O43657 245 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 AIREO43918 545 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 CNOT3O75175 753 aaKnown RBP10.26□□□□□ -0.77
RTN3-201ENST00000338850 ZNF217O75362 1048 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 UPK1BO75841 260 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 PDE9AO76083 593 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 C1orf105O95561 183 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 ETHE1O95571 254 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 B3GALT4O96024 378 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 C1GALT1C1LP0DN25 315 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 ERGP11308 486 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 CSRP1P21291 193 aaKnown RBP10.26□□□□□ -0.77
RTN3-201ENST00000338850 HSD17B2P37059 387 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 NNMTP40261 264 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 MAP2K4P45985 399 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 MAPK10P53779 464 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 SEMG2Q02383 582 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 DPTQ07507 201 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 RPA4Q13156 261 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 ENPP2Q13822 863 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 SCARB2Q14108 478 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 ARHGAP19Q14CB8 494 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 CYP2A13Q16696 494 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 ST3GAL2Q16842 350 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 MEDAGQ5VYS4 303 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 ERAP2Q6P179 960 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 PNCKQ6P2M8 343 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 SLC23A3Q6PIS1 610 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 RFLNAQ6ZTI6 216 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 Q6ZVU0 165 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 AHSA2Q719I0 299 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 SLC44A2Q8IWA5 706 aaPredicted RBP10.26□□□□□ -0.77
RTN3-201ENST00000338850 LINC00471Q8N535 108 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 DEFB119Q8N690 84 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 RASGEF1AQ8N9B8 481 aa10.26□□□□□ -0.77
RTN3-201ENST00000338850 CHST14Q8NCH0 376 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms