RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 HNRNPCL4P0DMR1 293 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 ENGP17813 658 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 HLCSP50747 726 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 GAS1P54826 345 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 RAB38P57729 211 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 EEF1A1P68104 462 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 MRPS22P82650 360 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 TFF2Q03403 129 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 FUT7Q11130 342 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 MERTKQ12866 999 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 DUSP8Q13202 625 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 PRICKLE4Q2TBC4 344 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 FAM98BQ52LJ0 330 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 ENTPD8Q5MY95 495 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 CDC73Q6P1J9 531 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 TBPL2Q6SJ96 375 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SYT12Q8IV01 421 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 CA13Q8N1Q1 262 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 FAM86B1Q8N7N1 296 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 GPR32P1Q8NGA4 272 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 OR8K5Q8NH50 307 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 ZNF420Q8TAQ5 688 aaPredicted RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 RPS4Y2Q8TD47 263 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 TAMM41Q96BW9 452 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 TCTN2Q96GX1 697 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 LOXL4Q96JB6 756 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 LRFN5Q96NI6 719 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SLC39A3Q9BRY0 314 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 BDH2Q9BUT1 245 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 DUSP21Q9H596 190 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 COQ10BQ9H8M1 238 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 FANCFQ9NPI8 374 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 EXOSC3Q9NQT5 275 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 AASDHPPTQ9NRN7 309 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 DUSP22Q9NRW4 184 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SIDT1Q9NXL6 827 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 REV1Q9UBZ9 1251 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 DAPP1Q9UN19 280 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 ANGPTL3Q9Y5C1 460 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 RANBP2P49792 3224 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 ANKRD61A6NGH8 418 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 RFXANKO14593 260 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 ZNF749O43361 778 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 NKX2-2O95096 273 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 TNFAIP8O95379 198 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 FAM58BPP0C7Q3 252 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 DCKP27707 260 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 DNAJA1P31689 397 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 CAPRIN1Q14444 709 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 NPTX1Q15818 432 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 ZNF141Q15928 474 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 CPSF6Q16630 551 aaKnown RBP eCLIP5.06□□□□□ -1.64e-6■□□□□ 9.6
PRPF4B-201ENST00000337659 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 C6orf132Q5T0Z8 1188 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 NXNQ6DKJ4 435 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 Q6ZSR6 202 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 TMEM179BQ7Z7N9 219 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 TMPRSS11BQ86T26 416 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 CMIPQ8IY22 773 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 TRIML2Q8N7C3 387 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 MORN4Q8NDC4 146 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 NSMCE2Q96MF7 247 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 CHID1Q9BWS9 393 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 PINK1Q9BXM7 581 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SEMA4CQ9C0C4 833 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 AMBRA1Q9C0C7 1298 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 RACGAP1Q9H0H5 632 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 GLIPR2Q9H4G4 154 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 MRPS30Q9NP92 439 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SMPD3Q9NY59 655 aaPredicted RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 NLGN3Q9NZ94 848 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 USP22Q9UPT9 525 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 LIPT1Q9Y234 373 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SNRNP200O75643 2136 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 BDP1A6H8Y1 2624 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 A0A1B0GTQ1 180 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 J3QRE1 110 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 CTSVO60911 334 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SEC14L2O76054 403 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 EPN2O95208 641 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 ZIC2O95409 532 aaPredicted RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 NSA2O95478 260 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 IL3P08700 152 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 HTR1BP28222 390 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 NEK2P51955 445 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 LIM2P55344 173 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 NUP107P57740 925 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SNRPGP62308 76 aaKnown RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 TOP3AQ13472 1001 aaPredicted RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 PDK3Q15120 406 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SEC23BQ15437 767 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 PMS2CLQ68D20 193 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 ASPGQ86U10 573 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 BPHLQ86WA6 291 aaPredicted RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SPPL2CQ8IUH8 684 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 TBC1D19Q8N5T2 526 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SH3KBP1Q96B97 665 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 PYCR2Q96C36 320 aa5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 CNRIP1Q96F85 164 aaPredicted RBP5.06□□□□□ -1.6
PRPF4B-201ENST00000337659 SLC47A1Q96FL8 570 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms