RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PLA2G10O15496 165 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 IL1AP01583 271 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 SDC2P34741 201 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 NKX3-2P78367 333 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 GPLD1P80108 840 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 PRSS53Q2L4Q9 553 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 LMNTD1Q8N9Z9 388 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 TVP23BQ9NYZ1 205 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 GPSM3Q9Y4H4 160 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 LATS1O95835 1130 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 CATP04040 527 aaKnown RBP22.48■■□□□ 1.19
TSKU-201ENST00000333090 TNNI3P19429 210 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 HTR2BP41595 481 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 GSTM5P46439 218 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 HEPACAMQ14CZ8 416 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 TMEM201Q5SNT2 666 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 DCST1Q5T197 706 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 MFSD4BQ5TF39 518 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 TMEM150AQ86TG1 271 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 OR8J1Q8NGP2 316 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 C16orf78Q8WTQ4 265 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 MSLNLQ96KJ4 702 aa22.48■■□□□ 1.19
TSKU-201ENST00000333090 POLR2J3Q9H1A7 115 aaKnown RBP22.48■■□□□ 1.19
TSKU-201ENST00000333090 A0A1W2PQ45 241 aaPredicted RBP22.47■■□□□ 1.19
TSKU-201ENST00000333090 A0A1W2PQY0 241 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 HEPACAM2A8MVW5 462 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 TSPAN6O43657 245 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 CCNYL3P0C7X3 344 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 ATN1P54259 1190 aaPredicted RBP22.47■■□□□ 1.19
TSKU-201ENST00000333090 REEP3Q6NUK4 255 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 Q6ZNB5 142 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 SLCO4C1Q6ZQN7 724 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 RASGRP3Q8IV61 690 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 MMP21Q8N119 569 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 YIPF7Q8N8F6 280 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 ATP6V1C2Q8NEY4 427 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 TMEM245Q9H330 911 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 STARD7Q9NQZ5 370 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 SPIN1Q9Y657 262 aaPredicted RBP22.47■■□□□ 1.19
TSKU-201ENST00000333090 HELZP42694 1942 aaKnown RBP22.47■■□□□ 1.19
TSKU-201ENST00000333090 ZNF197O14709 1029 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 LRRTM2O43300 516 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 TLX2O43763 284 aaPredicted RBP22.47■■□□□ 1.19
TSKU-201ENST00000333090 SEMA7AO75326 666 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 BCHEP06276 602 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 ELAVL4P26378 380 aaKnown RBP22.47■■□□□ 1.19
TSKU-201ENST00000333090 EFR3AQ14156 821 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.47■■□□□ 1.19
TSKU-201ENST00000333090 ATAT1Q5SQI0 421 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 TNFAIP8L2Q6P589 184 aaPredicted RBP22.47■■□□□ 1.19
TSKU-201ENST00000333090 PLET1Q6UQ28 207 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 CEACAM20Q6UY09 585 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 DEF8Q6ZN54 512 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 GLCCI1Q86VQ1 547 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 CLDN22Q8N7P3 220 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 SCLYQ96I15 445 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 NECTIN4Q96NY8 510 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 CITED4Q96RK1 184 aa22.47■■□□□ 1.19
TSKU-201ENST00000333090 C5orf58C9J3I9 102 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 POLR1CO15160 346 aaPredicted RBP22.46■■□□□ 1.19
TSKU-201ENST00000333090 ZDHHC20Q5W0Z9 365 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 C12orf73Q69YU5 71 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 DPY19L3Q6ZPD9 716 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 DNAJB7Q7Z6W7 309 aaPredicted RBP22.46■■□□□ 1.19
TSKU-201ENST00000333090 SYT14Q8NB59 555 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 OR56A3Q8NH54 315 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 DKK3Q9UBP4 350 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 PPIL1Q9Y3C6 166 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 KLK1P06870 262 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 SRPRAP08240 638 aaKnown RBP22.46■■□□□ 1.19
TSKU-201ENST00000333090 MEF2AQ02078 507 aaPredicted RBP22.46■■□□□ 1.19
TSKU-201ENST00000333090 FAPQ12884 760 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 TARDBPQ13148 414 aaKnown RBP eCLIP22.46■■□□□ 1.19
TSKU-201ENST00000333090 PDE7AQ13946 482 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 SLBPQ14493 270 aaKnown RBP eCLIP22.46■■□□□ 1.19
TSKU-201ENST00000333090 TATDN3Q17R31 274 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 TMCO2Q7Z6W1 182 aaPredicted RBP22.46■■□□□ 1.19
TSKU-201ENST00000333090 RBM45Q8IUH3 476 aaKnown RBP22.46■■□□□ 1.19
TSKU-201ENST00000333090 MCOLN1Q9GZU1 580 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 NDOR1Q9UHB4 597 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 NDRG2Q9UN36 371 aaKnown RBP22.46■■□□□ 1.19
TSKU-201ENST00000333090 MGAT4BQ9UQ53 548 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 ANAPC1Q9H1A4 1944 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 C5orf42Q9H799 3197 aa22.46■■□□□ 1.19
TSKU-201ENST00000333090 APOL3O95236 402 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 LGI1O95970 557 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 CST5P28325 142 aaPredicted RBP22.45■■□□□ 1.19
TSKU-201ENST00000333090 OPRD1P41143 372 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 IL12RB1P42701 662 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 SLC9A3P48764 834 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 TCTN3Q6NUS6 607 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 C22orf39Q6P5X5 142 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 Q6ZVL8 140 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 ZNF461Q8TAF7 563 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 C1GALT1C1Q96EU7 318 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 FAM83DQ9H4H8 585 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 MALT1Q9UDY8 824 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 SH2B3Q9UQQ2 575 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 CARD8Q9Y2G2 431 aa22.45■■□□□ 1.19
TSKU-201ENST00000333090 PSKH1P11801 424 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms