RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 LATS2Q9NRM7 1088 aa17.33■□□□□ 0.36
PKP3-201ENST00000331563 FNIP2Q9P278 1114 aa17.33■□□□□ 0.36
PKP3-201ENST00000331563 PADI2Q9Y2J8 665 aa17.33■□□□□ 0.36
PKP3-201ENST00000331563 DHRS7Q9Y394 339 aa17.33■□□□□ 0.36
PKP3-201ENST00000331563 ANKRD36A6QL64 1941 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 SYN3O14994 580 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 CLDN9O95484 217 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 PRAMEF1O95521 474 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 IFNA14P01570 189 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 RAB3AP20336 220 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 FEN1P39748 380 aaKnown RBP17.32■□□□□ 0.36
PKP3-201ENST00000331563 CLDN20P56880 219 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 RETSATQ6NUM9 610 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 HSDL2Q6YN16 418 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 PDZD3Q86UT5 571 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 SYT12Q8IV01 421 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 RASGRP3Q8IV61 690 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 FAM9CQ8IZT9 166 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 CHCHD4Q8N4Q1 142 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 OR6C4Q8NGE1 309 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 AUTS2Q8WXX7 1259 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 MED28Q9H204 178 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 PCDHB16Q9NRJ7 776 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 MARCH2Q9P0N8 246 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 RAI2Q9Y5P3 530 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 PCDH17O14917 1159 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 SEC14L5O43304 696 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 IL1AP01583 271 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 RGS4P49798 205 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 RAB14P61106 215 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 GANABQ14697 944 aaKnown RBP17.32■□□□□ 0.36
PKP3-201ENST00000331563 P2RY14Q15391 338 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 GPR139Q6DWJ6 353 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 CNIH2Q6PI25 160 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 USP30Q70CQ3 517 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 NPAS4Q8IUM7 802 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 AP3S1Q92572 193 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 APIPQ96GX9 242 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 FOPNLQ96NB1 174 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 CLEC4MQ9H2X3 399 aaPredicted RBP17.32■□□□□ 0.36
PKP3-201ENST00000331563 SAV1Q9H4B6 383 aaPredicted RBP17.32■□□□□ 0.36
PKP3-201ENST00000331563 SLC39A1Q9NY26 324 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 TRPS1Q9UHF7 1281 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 COPS3Q9UNS2 423 aa17.32■□□□□ 0.36
PKP3-201ENST00000331563 J3KTA2 159 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 MPZL2O60487 215 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 SLC43A1O75387 559 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 MAPK1P28482 360 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 ABATP80404 500 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 SERINC3Q13530 473 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 VEZF1Q14119 521 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 ELOAQ14241 798 aaKnown RBP17.31■□□□□ 0.36
PKP3-201ENST00000331563 PAQR6Q6TCH4 344 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 TMIGD1Q6UXZ0 262 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 AQP11Q8NBQ7 271 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 TMEM145Q8NBT3 493 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 DUSP18Q8NEJ0 188 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 MSLNLQ96KJ4 702 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 NELL2Q99435 816 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 TCF25Q9BQ70 676 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 SEC22CQ9BRL7 303 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 FBXO44Q9H4M3 255 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 NDUFB11Q9NX14 153 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 PRAMEF33A0A0G2JMD5 474 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 PRAMEF10O60809 474 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 RAF1P04049 648 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 CCL5P13501 91 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 HLA-EP13747 358 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 PTGER3P43115 390 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 FAM209BQ5JX69 171 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 SPOUT1Q5T280 376 aaKnown RBP17.31■□□□□ 0.36
PKP3-201ENST00000331563 FBXL22Q6P050 247 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 CLDN22Q8N7P3 220 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 FBXO22Q8NEZ5 403 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 OR7G3Q8NG95 312 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 WDR48Q8TAF3 677 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 USP7Q93009 1102 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 NXPE3Q969Y0 559 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 FUBP3Q96I24 572 aaKnown RBP eCLIP17.31■□□□□ 0.36
PKP3-201ENST00000331563 KCTD7Q96MP8 289 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 C12orf57Q99622 126 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 SPON2Q9BUD6 331 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 VN1R3Q9BXE9 311 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 PRDM5Q9NQX1 630 aaPredicted RBP17.31■□□□□ 0.36
PKP3-201ENST00000331563 AFF4Q9UHB7 1163 aaKnown RBP17.31■□□□□ 0.36
PKP3-201ENST00000331563 NCKAP1Q9Y2A7 1128 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 CACNG2Q9Y698 323 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 EYSQ5T1H1 3165 aa17.31■□□□□ 0.36
PKP3-201ENST00000331563 WDPCPO95876 746 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 HBQ1P09105 142 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 PCSK2P16519 638 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 ITGB7P26010 798 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 CRYBA2P53672 197 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 FCN2Q15485 313 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 PDXPQ96GD0 296 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 MARVELD1Q9BSK0 173 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 HDHD2Q9H0R4 259 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 RHCGQ9UBD6 479 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 TPST2O60704 377 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 DPM1O60762 260 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms