RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 OR2A1Q8NGT9 310 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 SLC38A4Q969I6 547 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 BTBD2Q9BX70 525 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 SERHL2Q9H4I8 314 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 NMNAT1Q9HAN9 279 aaPredicted RBP13.82□□□□□ -0.2
TPM3-206ENST00000330188 PHPT1Q9NRX4 125 aaPredicted RBP13.82□□□□□ -0.2
TPM3-206ENST00000330188 PNMA8BQ9ULN7 279 aaPredicted RBP13.82□□□□□ -0.2
TPM3-206ENST00000330188 KCNK6Q9Y257 313 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 PMF1-BGLAPU3KQ54 211 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 CLDN25C9JDP6 229 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 M0R082 166 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 M0R129 80 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 NADKO95544 446 aaPredicted RBP13.82□□□□□ -0.2
TPM3-206ENST00000330188 GASTP01350 101 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 EN2P19622 333 aaPredicted RBP13.82□□□□□ -0.2
TPM3-206ENST00000330188 LIPAP38571 399 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 RAB28P51157 221 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 RAB15P59190 212 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 PTGES3Q15185 160 aaKnown RBP13.82□□□□□ -0.2
TPM3-206ENST00000330188 DGUOKQ16854 277 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 OR4C11Q6IEV9 310 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 KLHL17Q6TDP4 642 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 ZNF793Q6ZN11 406 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 DCDC5Q6ZRR9 648 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 YAF2Q8IY57 180 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 TMCO5AQ8N6Q1 288 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 PSMA8Q8TAA3 256 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 TIMM29Q9BSF4 260 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 ACSS1Q9NUB1 689 aaPredicted RBP13.82□□□□□ -0.2
TPM3-206ENST00000330188 IMP3Q9NV31 184 aaKnown RBP13.82□□□□□ -0.2
TPM3-206ENST00000330188 FTSJ1Q9UET6 329 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.82□□□□□ -0.2
TPM3-206ENST00000330188 SLC6A14Q9UN76 642 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 ERGIC3Q9Y282 383 aa13.82□□□□□ -0.2
TPM3-206ENST00000330188 SULT1C4O75897 302 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 SERPIND1P05546 499 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 PKLRP30613 574 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 TGFBR1P36897 503 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 TRA2BP62995 288 aaKnown RBP13.81□□□□□ -0.2
TPM3-206ENST00000330188 FOXD4Q12950 439 aaPredicted RBP13.81□□□□□ -0.2
TPM3-206ENST00000330188 MLC1Q15049 377 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 SYT16Q17RD7 645 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 COLEC12Q5KU26 742 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 TAGAPQ8N103 731 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 CENPSQ8N2Z9 138 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 CHPT1Q8WUD6 406 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 LGALS12Q96DT0 336 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 COX4I2Q96KJ9 171 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 MAPKAP1Q9BPZ7 522 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 C17orf62Q9BQA9 187 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 DPH7Q9BTV6 452 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 IMPAD1Q9NX62 359 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 GPR83Q9NYM4 423 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 TAS2R7Q9NYW3 318 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 DUSP12Q9UNI6 340 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 PLEKHM1Q9Y4G2 1056 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 NINQ8N4C6 2090 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 TRBV4-1A0A0J9YWV2 114 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 PRAMEF27A3QJZ7 478 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 LRIT2A6NDA9 550 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 ZAR1LA6NP61 321 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 FAM227AF5H4B4 570 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 SH3BP5O60239 455 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 SEMA7AO75326 666 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 PDE9AO76083 593 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 STSP08842 583 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 SSR2P43308 183 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 CCT3P49368 545 aaKnown RBP13.81□□□□□ -0.2
TPM3-206ENST00000330188 TP53BP2Q13625 1128 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 TMEM236Q5W0B7 351 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 BTLAQ7Z6A9 289 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 ADCK1Q86TW2 530 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 FAM20CQ8IXL6 584 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 NLGN4XQ8N0W4 816 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 ZNF513Q8N8E2 541 aaPredicted RBP13.81□□□□□ -0.2
TPM3-206ENST00000330188 OR2L8Q8NGY9 312 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 PPP1R14BQ96C90 147 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 KXD1Q9BQD3 176 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 BTBD1Q9H0C5 482 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 GLIPR2Q9H4G4 154 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 HMG20AQ9NP66 347 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 ENOPH1Q9UHY7 261 aa13.81□□□□□ -0.2
TPM3-206ENST00000330188 PRR23AA6NEV1 266 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 PRR19A6NJB7 356 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 ANHXE9PGG2 379 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 CEACAM5P06731 702 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 CD72P21854 359 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 CHMP24386 653 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 GRK3P35626 688 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 BCL6P41182 706 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 CTSKP43235 329 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 KCNJ5P48544 419 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 CRISP1P54107 249 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 ITGADQ13349 1161 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 ZIC1Q15915 447 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 TIGD6Q17RP2 521 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 NDUFAF5Q5TEU4 345 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 TCTN3Q6NUS6 607 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 OR4D11Q8NGI4 311 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 ZNF354BQ96LW1 612 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms