RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 KCNC1P48547 511 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 DLX5P56178 289 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 MPEG1Q2M385 716 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 KBTBD12Q3ZCT8 623 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 PIGGQ5H8A4 983 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 GRTP1Q5TC63 336 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 ADNP2Q6IQ32 1131 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 OPN5Q6U736 354 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 UBE3DQ7Z6J8 389 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 SLC2A12Q8TD20 617 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 NINJ1Q92982 152 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 PTCD3Q96EY7 689 aaKnown RBP13.15□□□□□ -0.3
RPP40-201ENST00000319533 KCNC2Q96PR1 638 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 F2RL3Q96RI0 385 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 GPR22Q99680 433 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 TMUB1Q9BVT8 246 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 ROGDIQ9GZN7 287 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 SH2D2AQ9NP31 389 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 SACM1LQ9NTJ5 587 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 DNAJC11Q9NVH1 559 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 Q9UFV3 132 aa13.15□□□□□ -0.3
RPP40-201ENST00000319533 MTO1Q9Y2Z2 717 aaKnown RBP13.15□□□□□ -0.3
RPP40-201ENST00000319533 EML6Q6ZMW3 1958 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 C17orf105B2RV13 164 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 G3V3Y1 287 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 CLGNO14967 610 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 CTIFO43310 598 aaKnown RBP13.14□□□□□ -0.31
RPP40-201ENST00000319533 HCN1O60741 890 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 WDR1O75083 606 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 SCELO95171 688 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 ADH7P40394 386 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 CASP2P42575 452 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 RAB10P61026 200 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 IGLV3-21P80748 117 aaPredicted RBP13.14□□□□□ -0.31
RPP40-201ENST00000319533 TGM3Q08188 693 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 STX4Q12846 297 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 DOC2AQ14183 400 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 SLMAPQ14BN4 828 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 TBCCQ15814 346 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 SLC25A35Q3KQZ1 300 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 SULT1C3Q6IMI6 304 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 ZNF585AQ6P3V2 769 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 ADGRD1Q6QNK2 874 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 ZNF793Q6ZN11 406 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 LIX1LQ8IVB5 337 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 SRFBP1Q8NEF9 429 aaKnown RBP13.14□□□□□ -0.31
RPP40-201ENST00000319533 NUBPLQ8TB37 319 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 ZNF721Q8TF20 911 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 IFT81Q8WYA0 676 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 ANKRD9Q96BM1 317 aaPredicted RBP13.14□□□□□ -0.31
RPP40-201ENST00000319533 POM121Q96HA1 1249 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 FOXC2Q99958 501 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 TBCDQ9BTW9 1192 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 EFCAB11Q9BUY7 163 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 OR8D2Q9GZM6 311 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 CNOT10Q9H9A5 744 aaKnown RBP13.14□□□□□ -0.31
RPP40-201ENST00000319533 COPS7BQ9H9Q2 264 aaPredicted RBP13.14□□□□□ -0.31
RPP40-201ENST00000319533 CAB39LQ9H9S4 337 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 TUBA8Q9NY65 449 aaPredicted RBP13.14□□□□□ -0.31
RPP40-201ENST00000319533 ATG4BQ9Y4P1 393 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 PCDHGB3Q9Y5G1 929 aa13.14□□□□□ -0.31
RPP40-201ENST00000319533 ANKHD1Q8IWZ3 2542 aaKnown RBP13.13□□□□□ -0.31
RPP40-201ENST00000319533 MYOCOSA0A1B0GUC4 107 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 NCF1BA6NI72 391 aaPredicted RBP13.13□□□□□ -0.31
RPP40-201ENST00000319533 NCF1CA8MVU1 366 aaPredicted RBP13.13□□□□□ -0.31
RPP40-201ENST00000319533 PHGDHO43175 533 aaKnown RBP13.13□□□□□ -0.31
RPP40-201ENST00000319533 LDB3O75112 727 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 CTAG2O75638 210 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 STK16O75716 305 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 ETHE1O95571 254 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 C1QAP02745 245 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 IGKV3-11P04433 115 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 P04436 131 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 CELA3AP09093 270 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 CCL3P10147 92 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 NCF1P14598 390 aaPredicted RBP13.13□□□□□ -0.31
RPP40-201ENST00000319533 EPORP19235 508 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 TNNI3P19429 210 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 ATP5A1P25705 553 aaKnown RBP13.13□□□□□ -0.31
RPP40-201ENST00000319533 DNASE1L1P49184 302 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 MAN2A2P49641 1150 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 IST1P53990 364 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 ATP6V0D1P61421 351 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 MYBPHQ13203 477 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 LAPTM5Q13571 262 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 SLC10A1Q14973 349 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 ERCC6LQ2NKX8 1250 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 ZNF791Q3KP31 576 aaPredicted RBP13.13□□□□□ -0.31
RPP40-201ENST00000319533 C1orf185Q5T7R7 199 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 RIPPLY2Q5TAB7 128 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 FAM47EQ6ZV65 393 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 RAPH1Q70E73 1250 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 TMEM200AQ86VY9 491 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 GPSM1Q86YR5 675 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 ACOT4Q8N9L9 421 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 PDPRQ8NCN5 879 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 OR10Q1Q8NGQ4 319 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 SARAFQ96BY9 339 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 FMO2Q99518 471 aa13.13□□□□□ -0.31
RPP40-201ENST00000319533 MAPKAP1Q9BPZ7 522 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms