RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 GSAPA4D1B5 854 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 DLL1O00548 723 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 FFAR1O14842 300 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 SMAD6O43541 496 aaKnown RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 ORC5O43913 435 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 SH3BP5O60239 455 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 IL1AP01583 271 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 IFNW1P05000 195 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF30P17039 623 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 SOX18P35713 384 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 NUDT1P36639 197 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 SOX9P48436 509 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 XKP51811 444 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 MVDP53602 400 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 CSTF1Q05048 431 aaKnown RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 GRB14Q14449 540 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 ATP13A5Q4VNC0 1218 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 CEACAM20Q6UY09 585 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 MSANTD1Q6ZTZ1 278 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 LRRC70Q7Z2Q7 622 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 C16orf62Q7Z3J2 963 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 PLEKHH3Q7Z736 793 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 UBE2Q1Q7Z7E8 422 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 NXPE1Q8N323 547 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF431Q8TF32 576 aaPredicted RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 TM9SF4Q92544 642 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 AKAP1Q92667 903 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 MSLNLQ96KJ4 702 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 C1QTNF6Q9BXI9 259 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 TMEM245Q9H330 911 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 SGK2Q9HBY8 427 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 SLC25A19Q9HC21 320 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 LHX3Q9UBR4 397 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 RUVBL1Q9Y265 456 aaKnown RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 PRKAB1Q9Y478 270 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 CCL15-CCL14A0A0B4J2E2 113 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 SNTNA6NMZ2 147 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 HEPACAM2A8MVW5 462 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 PRRG1O14668 218 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 PRKYO43930 277 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 MPZL2O60487 215 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 CLDN11O75508 207 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 SLC22A5O76082 557 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 M6PRP20645 277 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 IDSP22304 550 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 ITGB7P26010 798 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 AGFG1P52594 562 aaKnown RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 ABATP80404 500 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 MLLT11Q13015 90 aaPredicted RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 HEPACAMQ14CZ8 416 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 NCF4Q15080 339 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 CCL15Q16663 113 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 ZBTB37Q5TC79 503 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 TNFAIP8L2Q6P589 184 aaPredicted RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 UNC5DQ6UXZ4 953 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 GDPGP1Q6ZNW5 385 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 GHDCQ8N2G8 530 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 TTC9Q92623 222 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 ASIC4Q96FT7 647 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 LRR1Q96L50 414 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 SAMD11Q96NU1 681 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 DPCDQ9BVM2 203 aaPredicted RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 GTPBP2Q9BX10 602 aaKnown RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 POLR2J3Q9H1A7 115 aaKnown RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 RDH14Q9HBH5 336 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 ENPP4Q9Y6X5 453 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 C2orf92A0A1B0GVN3 265 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PCP4L1A6NKN8 68 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 SHOXO15266 292 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 AKAP8O43823 692 aaKnown RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 DPM1O60762 260 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 JUPP14923 745 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 DDCP20711 480 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PSMA3P25788 255 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 ATP5C1P36542 298 aaKnown RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 CSNK1DP48730 415 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PURAQ00577 322 aaKnown RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 FABP5Q01469 135 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 NAE1Q13564 534 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 IL20RBQ6UXL0 311 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 USP45Q70EL2 814 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 LHFPL3Q86UP9 236 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 MMP21Q8N119 569 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 FAM181AQ8N9Y4 354 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 L3MBTL4Q8NA19 623 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 HUS1BQ8NHY5 278 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 C17orf62Q9BQA9 187 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PAK6Q9NQU5 681 aaPredicted RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 COLQQ9Y215 455 aaPredicted RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 RPL36Q9Y3U8 105 aaKnown RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PCDHB7Q9Y5E2 793 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 COL4A4P53420 1690 aaPredicted RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PLXNA4Q9HCM2 1894 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 A0A0U1RQF3 1178 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 TOXO94900 526 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PAHP00439 452 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 OPRD1P41143 372 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 CCT3P49368 545 aaKnown RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 SRP54P61011 504 aaKnown RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 RAE1P78406 368 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms