RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 FAM92BQ6ZTR7 304 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 CROCCP2Q86T23 111 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 AKAP14Q86UN6 197 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 TRABD2AQ86V40 505 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 STX12Q86Y82 276 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 KMT5CQ86Y97 462 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 GLB1L3Q8NCI6 653 aaPredicted RBP7.84□□□□□ -1.15
CHD6-201ENST00000309279 PDPRQ8NCN5 879 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 RCBTB1Q8NDN9 531 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 GATA6Q92908 595 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 RFKQ969G6 155 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 RHBDF1Q96CC6 855 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 FER1L6-AS2Q96M78 137 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 CMKLR1Q99788 373 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 SCNM1Q9BWG6 230 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 SGPP1Q9BX95 441 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 STRADBQ9C0K7 418 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 PITHD1Q9GZP4 211 aaPredicted RBP7.84□□□□□ -1.15
CHD6-201ENST00000309279 ALG9Q9H6U8 611 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 COQ10BQ9H8M1 238 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 BRF2Q9HAW0 419 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 C12orf10Q9HB07 376 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 CCM2LQ9NUG4 571 aaPredicted RBP7.84□□□□□ -1.15
CHD6-201ENST00000309279 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.84□□□□□ -1.152e-6■■■□□ 17.6
CHD6-201ENST00000309279 KLHL14Q9P2G3 628 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 DCDC2Q9UHG0 476 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 RNF112Q9ULX5 631 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 NEUROG3Q9Y4Z2 214 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 FRYQ5TBA9 3013 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 ADAMTS20P59510 1910 aa7.84□□□□□ -1.15
CHD6-201ENST00000309279 SPTBP11277 2137 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 LAMA5O15230 3695 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 A0A1W2PNU3 283 aaPredicted RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 A0A1W2PPW3 197 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 BLACEA4D250 179 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 SH3D21A4FU49 640 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 TMEM247A6NEH6 219 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 SYCE1LA8MT33 242 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 AHRRA9YTQ3 701 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 ISM1B1AKI9 464 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 MAP2K7O14733 419 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 KLK8O60259 260 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 RASSF9O75901 435 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 IPO13O94829 963 aaKnown RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 ZBTB11O95625 1053 aaPredicted RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 PTBP3O95758 552 aaKnown RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 CLUP10909 449 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 PRKCAP17252 672 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 NELFEP18615 380 aaKnown RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 KRT4P19013 534 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 ARL3P36405 182 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 CASP3P42574 277 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 SLC6A12P48065 614 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 GLRBP48167 497 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 HNRNPH2P55795 449 aaKnown RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 TBPL1P62380 186 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 RAPSNQ13702 412 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 SPCS2Q15005 226 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 SEC23BQ15437 767 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 SF1Q15637 639 aaKnown RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 SLC9B1Q4ZJI4 515 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 EXOSC6Q5RKV6 272 aaKnown RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 SULT1C3Q6IMI6 304 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 CAPN13Q6MZZ7 669 aaPredicted RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 FRA10AC1Q70Z53 315 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 CPLX4Q7Z7G2 160 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 MARCH9Q86YJ5 346 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 KLHDC8AQ8IYD2 350 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 D2HGDHQ8N465 521 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 C2orf73Q8N5S3 287 aaPredicted RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 ARFGAP2Q8N6H7 521 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 POU5F2Q8N7G0 328 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 BMPERQ8N8U9 685 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 PPFIBP2Q8ND30 876 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 OR2L3Q8NG85 312 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 SLC13A3Q8WWT9 602 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 LZICQ8WZA0 190 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 RNF125Q96EQ8 232 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 TRAPPC9Q96Q05 1148 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 PIP5K1AQ99755 562 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 MRPL57Q9BQC6 102 aaKnown RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 SHCBP1LQ9BZQ2 653 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 NRSN2Q9GZP1 204 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 PCBD2Q9H0N5 130 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 ATG10Q9H0Y0 220 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 PCMTD2Q9NV79 361 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 SMPD3Q9NY59 655 aaPredicted RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 NUDT4Q9NZJ9 180 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 KLHL3Q9UH77 587 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 KLK13Q9UKR3 277 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 BTRCQ9Y297 605 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 MDC1Q14676 2089 aaKnown RBP7.83□□□□□ -1.16
CHD6-201ENST00000309279 SEC16AO15027 2179 aa7.83□□□□□ -1.16
CHD6-201ENST00000309279 CCDC187A0A096LP49 1063 aa7.82□□□□□ -1.16
CHD6-201ENST00000309279 IGKV1-8A0A0C4DH67 115 aa7.82□□□□□ -1.16
CHD6-201ENST00000309279 A0A0J9YY10 115 aa7.82□□□□□ -1.16
CHD6-201ENST00000309279 URADA6NGE7 173 aa7.82□□□□□ -1.16
CHD6-201ENST00000309279 A8MU76 341 aa7.82□□□□□ -1.16
CHD6-201ENST00000309279 GOLGA8RI6L899 631 aa7.82□□□□□ -1.16
CHD6-201ENST00000309279 TAPBPO15533 448 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms