RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ZNF136P52737 540 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 SCAPQ12770 1279 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 ZNF773Q6PK81 442 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 FCGR1BQ92637 280 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 PTERQ96BW5 349 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 HNRNPABQ99729 332 aaKnown RBP12.14□□□□□ -0.47
USP38-201ENST00000307017 CCDC106Q9BWC9 280 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 LRRN3Q9H3W5 708 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 TNFP01375 233 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 ADH5P11766 374 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 PEPDP12955 493 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 AGXTP21549 392 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 TMEM126BQ8IUX1 230 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 BATF2Q8N1L9 274 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 TCEAL3Q969E4 200 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 TGM7Q96PF1 710 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 ZNF317Q96PQ6 595 aaPredicted RBP12.14□□□□□ -0.47
USP38-201ENST00000307017 MAGEH1Q9H213 219 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 CALML5Q9NZT1 146 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 PCTPQ9UKL6 214 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 IQGAP1P46940 1657 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 ILVBLA1L0T0 632 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 FKTNO75072 461 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ATE1O95260 518 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 IL3P08700 152 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ZNF41P51814 821 aaPredicted RBP12.13□□□□□ -0.47
USP38-201ENST00000307017 TRIM61Q5EBN2 209 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 TRAPPC6BQ86SZ2 158 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ZNF584Q8IVC4 421 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 GNPDA2Q8TDQ7 276 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 MAFBQ9Y5Q3 323 aaPredicted RBP12.13□□□□□ -0.47
USP38-201ENST00000307017 ALDOBP05062 364 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 MAGEA6P43360 314 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 FKBP1BP68106 108 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 MCHR1Q99705 422 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ACBD6Q9BR61 282 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ACTR6Q9GZN1 396 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 EMC3Q9P0I2 261 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 CLEC4EQ9ULY5 219 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 MED16Q9Y2X0 877 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 MT-ND2P03891 347 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 HOXC6P09630 235 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 PSMB10P40306 273 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 HLCSP50747 726 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 PLBD1Q6P4A8 553 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 USP50Q70EL3 339 aaPredicted RBP12.13□□□□□ -0.47
USP38-201ENST00000307017 BEST3Q8N1M1 668 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ASCC1Q8N9N2 400 aaKnown RBP12.13□□□□□ -0.47
USP38-201ENST00000307017 A6NLC8 198 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ARPC5O15511 151 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 FRS3O43559 492 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 GJB3O75712 270 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 HEXBP07686 556 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 FOSL1P15407 271 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 HOXC5Q00444 222 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ITPRIPL2Q3MIP1 535 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ERMP1Q7Z2K6 904 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 NPAS3Q8IXF0 933 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 HCAR2Q8TDS4 363 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 PAQR8Q8TEZ7 354 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 SCRN2Q96FV2 425 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 KLHL15Q96M94 604 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 RABL2BQ9UNT1 228 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 TEX264Q9Y6I9 313 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 SRPRAP08240 638 aaKnown RBP12.13□□□□□ -0.47
USP38-201ENST00000307017 H2BFMP0C1H6 154 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ANXA8P13928 327 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 SLAMF1Q13291 335 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 CTC1Q2NKJ3 1217 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 OR4K13Q8NH42 304 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 TSPEARQ8WU66 669 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 FKRPQ9H9S5 495 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 DHDHQ9UQ10 334 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 TLR6Q9Y2C9 796 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 OR1A2Q9Y585 309 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 TARBP1Q13395 1621 aaKnown RBP12.13□□□□□ -0.47
USP38-201ENST00000307017 FAM159BA6NKW6 160 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 FGF3P11487 239 aaPredicted RBP12.13□□□□□ -0.47
USP38-201ENST00000307017 CILP2Q8IUL8 1156 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 CD244Q9BZW8 370 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 ARMC1Q9NVT9 282 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 GPRC5BQ9NZH0 403 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 OR6C2Q9NZP2 312 aa12.13□□□□□ -0.47
USP38-201ENST00000307017 K7EPK0 472 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 FLRT2O43155 660 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 RFPL1O75677 317 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 MT-ND4P03905 459 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 GP1BBP13224 206 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 ETFAP13804 333 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 DNASE1P24855 282 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 CRYZQ08257 329 aaKnown RBP12.12□□□□□ -0.47
USP38-201ENST00000307017 HSD17B12Q53GQ0 312 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 MEX3BQ6ZN04 569 aaKnown RBP12.12□□□□□ -0.47
USP38-201ENST00000307017 FAM71E2Q8N5Q1 922 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 RSC1A1Q92681 617 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 GYPBP06028 91 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 CCBE1Q6UXH8 406 aaPredicted RBP12.12□□□□□ -0.47
USP38-201ENST00000307017 CERS6Q6ZMG9 384 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 TMEM151BQ8IW70 566 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms