RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 WDPCPO95876 746 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 ST3GAL3Q11203 375 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 FAM78AQ5JUQ0 283 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF678Q5SXM1 525 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 CDCA2Q69YH5 1023 aaPredicted RBP7.47□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF585AQ6P3V2 769 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 HSD11B1LQ7Z5J1 315 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 CARM1Q86X55 608 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 NKD2Q969F2 451 aaPredicted RBP7.47□□□□□ -1.21
SCN9A-201ENST00000303354 MAL2Q969L2 176 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 C3orf49Q96BT1 292 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 ALOXE3Q9BYJ1 711 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 F5H5K5 113 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 PTGESO14684 152 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 TACSTD2P09758 323 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 CD6P30203 668 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 HOXA11P31270 313 aaPredicted RBP7.47□□□□□ -1.21
SCN9A-201ENST00000303354 AKR1D1P51857 326 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 NAA20P61599 178 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 NIPAL4Q0D2K0 466 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 TRIM61Q5EBN2 209 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF548Q8NEK5 533 aaPredicted RBP7.47□□□□□ -1.21
SCN9A-201ENST00000303354 C12orf49Q9H741 205 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 ACTR10Q9NZ32 417 aa7.47□□□□□ -1.21
SCN9A-201ENST00000303354 C17orf105B2RV13 164 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 ONECUT3O60422 494 aaPredicted RBP7.46□□□□□ -1.21
SCN9A-201ENST00000303354 TGDSO95455 350 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 LCKP06239 509 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 EMP2P54851 167 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 HOXC5Q00444 222 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 ST3GAL4Q11206 333 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 SCAPQ12770 1279 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 MEP1AQ16819 746 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 IQCCQ4KMZ1 466 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 SAMD14Q8IZD0 417 aaPredicted RBP7.46□□□□□ -1.21
SCN9A-201ENST00000303354 WDTC1Q8N5D0 677 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 OR5D16Q8NGK9 328 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 LRRC15Q8TF66 581 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 COL1A1P02452 1464 aaPredicted RBP7.46□□□□□ -1.21
SCN9A-201ENST00000303354 A8MV72 311 aaPredicted RBP7.46□□□□□ -1.21
SCN9A-201ENST00000303354 NUDT21O43809 227 aaKnown RBP7.46□□□□□ -1.21
SCN9A-201ENST00000303354 ITGA10O75578 1167 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 STSP08842 583 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 KHDC1LQ5JSQ8 128 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 THOC7Q6I9Y2 204 aaKnown RBP7.46□□□□□ -1.21
SCN9A-201ENST00000303354 NTAN1Q96AB6 310 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 METTL2AQ96IZ6 378 aaKnown RBP7.46□□□□□ -1.21
SCN9A-201ENST00000303354 NODALQ96S42 347 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 SUCNR1Q9BXA5 334 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 FAM234AQ9H0X4 552 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 CXCL16Q9H2A7 254 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 NDUFA13Q9P0J0 144 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 ACSL5Q9ULC5 683 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 KIF1AQ12756 1690 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 IRGMA1A4Y4 181 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 LCHNA4D1U4 455 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 CD8B2A6NJW9 211 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 FRS3O43559 492 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 VEGFDO43915 354 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 CD8BP10966 210 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 PON3Q15166 354 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 IRF4Q15306 451 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 DNM1P34Q6PK57 102 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 NPAS3Q8IXF0 933 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 KLHDC8AQ8IYD2 350 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 C3orf58Q8NDZ4 430 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 CANT1Q8WVQ1 401 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 HSH2DQ96JZ2 352 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 FAM71F1Q96KD3 344 aaPredicted RBP7.46□□□□□ -1.21
SCN9A-201ENST00000303354 SMPD3Q9NY59 655 aaPredicted RBP7.46□□□□□ -1.21
SCN9A-201ENST00000303354 SUSD2Q9UGT4 822 aa7.46□□□□□ -1.21
SCN9A-201ENST00000303354 EPHA1P21709 976 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 FOXN2P32314 431 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 GBX1Q14549 363 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 DAZLQ92904 295 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 SLC6A18Q96N87 628 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 ARRDC1-AS1Q9H2J1 176 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 DHCR7Q9UBM7 475 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 PLEKHM1Q9Y4G2 1056 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 SPEF1Q9Y4P9 236 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF28P17035 718 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 PRKCAP17252 672 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 DIO3P55073 304 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 EXOSC7Q15024 291 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 NPTX1Q15818 432 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 PLEKHS1Q5SXH7 462 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 LEG1Q6P5S2 330 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 HACD2Q6Y1H2 254 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 ZC3HC1Q86WB0 502 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF845Q96IR2 970 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 SEZ6LQ9BYH1 1024 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 NPIPB15A6NHN6 443 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 SCELO95171 688 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 SFTPBP07988 381 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 SRPRAP08240 638 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 BCKDHAP12694 445 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 DRD1P21728 446 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 PBX1P40424 430 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 SLC18A2Q05940 514 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM236Q5W0B7 351 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms