RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 FAM189A2Q15884 450 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 FAM214AQ32MH5 1076 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 LMX1AQ8TE12 382 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 ORAI3Q9BRQ5 295 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 RPS3P23396 243 aaKnown RBP eCLIP20.17■□□□□ 0.824e-8■■□□□ 13.9
LETM1-201ENST00000302787 LCN1P31025 176 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 GABRA3P34903 492 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 SPHARQ15513 63 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 C22orf42Q6IC83 251 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 LHFPL3Q86UP9 236 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 GKN2Q86XP6 184 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 OR4K17Q8NGC6 315 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 OR2M4Q96R27 311 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 MYH3P11055 1940 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 C1orf226A1L170 272 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 SH3PXD2BA1X283 911 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 SLC9A3P48764 834 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 TRAM1Q15629 374 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 TMEM107Q6UX40 140 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 AKAP1Q92667 903 aaKnown RBP eCLIP20.17■□□□□ 0.821e-6■■■■□ 25.7
LETM1-201ENST00000302787 PCDHGB5Q9Y5G0 923 aa20.17■□□□□ 0.82
LETM1-201ENST00000302787 ZNF865P0CJ78 1059 aaPredicted RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 HK3P52790 923 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.16■□□□□ 0.82
LETM1-201ENST00000302787 HCAR2Q8TDS4 363 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 HSPA12BQ96MM6 686 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 SDR39U1Q9NRG7 319 aaPredicted RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 HRASLS2Q9NWW9 162 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 SLCO3A1Q9UIG8 710 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 FARSAQ9Y285 508 aaKnown RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 ETFAP13804 333 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 SYN1P17600 705 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 HRH2P25021 359 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 GALNT10Q86SR1 603 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 MFSD2AQ8NA29 543 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 SH3YL1Q96HL8 342 aaPredicted RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 FEVQ99581 238 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 ANKRD60Q9BZ19 345 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 RNF38Q9H0F5 515 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 STOX2Q9P2F5 926 aaPredicted RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 SPO11Q9Y5K1 396 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 FEZF1A0PJY2 475 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 MITFO75030 526 aaPredicted RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 GABBR2O75899 941 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 TSPAN33Q86UF1 283 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 RASGRP3Q8IV61 690 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 OR6N2Q8NGY6 317 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 GATAD2BQ8WXI9 593 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 THRSPQ92748 146 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 RBCK1Q9BYM8 510 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 MYH13Q9UKX3 1938 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 CCDC88AQ3V6T2 1871 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 TPD52L2O43399 206 aaKnown RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 CSTBP04080 98 aaKnown RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 OR8D2Q9GZM6 311 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 C2orf74A8MZ97 194 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 RNF13O43567 381 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 HCKP08631 526 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 DCKP27707 260 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 MAGEA6P43360 314 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 SPINT3P49223 89 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 RNF144AP50876 292 aaPredicted RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 VSX2P58304 361 aaPredicted RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 RPS21P63220 83 aaKnown RBP20.16■□□□□ 0.82
LETM1-201ENST00000302787 LRRTM3Q86VH5 581 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 NETO1Q8TDF5 533 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 NRG4Q8WWG1 115 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 HPF1Q9NWY4 346 aa20.16■□□□□ 0.82
LETM1-201ENST00000302787 MYADML2A6NDP7 307 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 DISC1C4P0D8 188 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 FGF4P08620 206 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 NR2C1P13056 603 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 VAMP2P63027 116 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 CCDC54Q8NEL0 328 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 OR52P1PQ8NH57 321 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 FCAMRQ8WWV6 532 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 P2RY13Q9BPV8 354 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 GPR83Q9NYM4 423 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 E7EQ34 232 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 MAN2A2P49641 1150 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 NFATC3Q12968 1075 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 PAGE3Q5JUK9 113 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 CCSAPQ6IQ19 270 aaPredicted RBP20.15■□□□□ 0.82
LETM1-201ENST00000302787 RPL13AP3Q6NVV1 102 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 CEACAM19Q7Z692 300 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 SPAG16Q8N0X2 631 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 OR8K3Q8NH51 312 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 FAM83CQ9BQN1 747 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 MTMR10Q9NXD2 777 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 GPRC5BQ9NZH0 403 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 STUB1Q9UNE7 303 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 BACE2Q9Y5Z0 518 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 C5P01031 1676 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 C9J4A7 227 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 ANHXE9PGG2 379 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 M0QZQ0 153 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 TNFRSF10BO14763 440 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 ITGA5P08648 1049 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 SOX2P48431 317 aa20.15■□□□□ 0.82
LETM1-201ENST00000302787 ITPRIPL2Q3MIP1 535 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms