RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SEMA7AO75326 666 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 RHOCP08134 193 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 OSMP13725 252 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 JUPP14923 745 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 BPIP17213 487 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 LHCGRP22888 699 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 ETV3P41162 512 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CDH4P55283 916 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CTBP2P56545 445 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 GRB14Q14449 540 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 SF3A2Q15428 464 aaKnown RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CHRNA6Q15825 494 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CRTC2Q53ET0 693 aaPredicted RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 MRPL10Q7Z7H8 261 aaKnown RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 COMMD7Q86VX2 200 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 DENND1CQ8IV53 801 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 DNAJC5GQ8N7S2 189 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 TOR1AIP2Q8NFQ8 470 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 OR5AK3PQ8NH89 298 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 TMEM163Q8TC26 289 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF431Q8TF32 576 aaPredicted RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 AP3S1Q92572 193 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 PIGUQ9H490 435 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 LHX3Q9UBR4 397 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 RUVBL1Q9Y265 456 aaKnown RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 SHISA3A0PJX4 238 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 H3BN98 237 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 ACSL4O60488 711 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 RAF1P04049 648 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CCR7P32248 378 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 TALDO1P37837 337 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 FABP5Q01469 135 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 MRPL58Q14197 206 aaKnown RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 PUM1Q14671 1186 aaKnown RBP eCLIP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 PLK5Q496M5 336 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 RNLSQ5VYX0 342 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 QSOX2Q6ZRP7 698 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 VRK3Q8IV63 474 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 GHDCQ8N2G8 530 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 ZFP41Q8N8Y5 198 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 OR11H7Q8NGC8 314 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 WDR20Q8TBZ3 569 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 SKA2Q8WVK7 121 aaPredicted RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 AIFM2Q9BRQ8 373 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 SLC35A5Q9BS91 424 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 SPATA6Q9NWH7 488 aaPredicted RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 SLCO1C1Q9NYB5 712 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF282Q9UDV7 671 aaPredicted RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 STOML2Q9UJZ1 356 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 KCND3Q9UK17 655 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 RAB23Q9ULC3 237 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 SCML1Q9UN30 329 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 PCDHB7Q9Y5E2 793 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 A8MX80 341 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CLDN7O95471 211 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 ADAP00813 363 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 TPOP07202 933 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 ICAM2P13598 275 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 RHCEP18577 417 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 HOXC8P31273 242 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 EVX1P49640 407 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CLCNKAP51800 687 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CDK6Q00534 326 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 IKZF1Q13422 519 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 ANGPT1Q15389 498 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CCDC85BQ15834 202 aaPredicted RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 AANATQ16613 207 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 C16orf59Q7L2K0 433 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CDH24Q86UP0 819 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 BMPERQ8N8U9 685 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 HJURPQ8NCD3 748 aaPredicted RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 GPR156Q8NFN8 814 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 LHFPL5Q8TAF8 219 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 UCN3Q969E3 161 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 CREB3L1Q96BA8 519 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 TOE1Q96GM8 510 aaKnown RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 ATF6BQ99941 703 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 P2RY13Q9BPV8 354 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 HTATIP2Q9BUP3 242 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 RSPO3Q9BXY4 272 aaPredicted RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 C1GALT1Q9NS00 363 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 DNAJC11Q9NVH1 559 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF224Q9NZL3 707 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 HCN2Q9UL51 889 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 PCDHB8Q9UN66 801 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 DIMT1Q9UNQ2 313 aaKnown RBP10.36□□□□□ -0.75
ZNF558-201ENST00000301475 RWDD3Q9Y3V2 267 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 TRPV2Q9Y5S1 764 aa10.36□□□□□ -0.75
ZNF558-201ENST00000301475 VWA8A3KMH1 1905 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 SERTM1A2A2V5 107 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 SGK494L7N484 410 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 PRKYO43930 277 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 C6orf47O95873 294 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 PAHP00439 452 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 ANXA4P09525 319 aaPredicted RBP10.35□□□□□ -0.75
ZNF558-201ENST00000301475 HK1P19367 917 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 CD79BP40259 229 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 NNMTP40261 264 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 PCBP3P57721 371 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms