RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 TTLL8A6PVC2 850 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 MAGEB17A8MXT2 336 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 CXCL14O95715 111 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 EPOP01588 193 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 MMP2P08253 660 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 CELP19835 753 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 MC4RP32245 332 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 KIR3DL1P43629 444 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 LILRA4P59901 499 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 KCNJ10P78508 379 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 C1DQ13901 141 aaKnown RBP13.76□□□□□ -0.21
CDT1-201ENST00000301019 RETSATQ6NUM9 610 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 TSEN54Q7Z6J9 526 aaKnown RBP13.76□□□□□ -0.21
CDT1-201ENST00000301019 UNC93AQ86WB7 457 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 GANCQ8TET4 914 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 ZSWIM3Q96MP5 696 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 SERPINB11Q96P15 392 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 TMEM168Q9H0V1 697 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 PLCL2Q9UPR0 1127 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 MAP4K5Q9Y4K4 846 aa13.76□□□□□ -0.21
CDT1-201ENST00000301019 IGKV6D-21A0A0A0MT36 114 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 HYKKA2RU49 373 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 KHNYNO15037 678 aaKnown RBP13.75□□□□□ -0.21
CDT1-201ENST00000301019 TSPAN12O95859 305 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 DHFRP00374 187 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 TFPIP10646 304 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 TAF6P49848 677 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 LIMK1P53667 647 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 FABP5Q01469 135 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 CLLU1Q5K131 121 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 COX20Q5RI15 118 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 RAET1GQ6H3X3 334 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 CRYBG2Q8N1P7 616 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 CHST13Q8NET6 341 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 RELTQ969Z4 430 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 C7orf34Q96L11 122 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 TMEM43Q9BTV4 400 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 TAPBPLQ9BX59 468 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 NLNQ9BYT8 704 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 SPATC1LQ9H0A9 340 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 ESRP2Q9H6T0 727 aaKnown RBP13.75□□□□□ -0.21
CDT1-201ENST00000301019 TPT1P8Q9HAU6 139 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 PCDHB7Q9Y5E2 793 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 WDR81Q562E7 1941 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 A0A0B4J203 849 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 PRSS44E7EML9 344 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 BET1O15155 118 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 OR10H3O60404 316 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 CH25HO95992 272 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 OTCP00480 354 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 LAMP1P11279 417 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 PKMP14618 531 aaKnown RBP13.75□□□□□ -0.21
CDT1-201ENST00000301019 ELK1P19419 428 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 RAB3BP20337 219 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 ITPKAP23677 461 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 DUSP4Q13115 394 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 FAM74A1Q5RGS3 127 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 FAM27D1Q5T7N8 215 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 ELP2Q6IA86 826 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 XRRA1Q6P2D8 792 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 CALHM3Q86XJ0 350 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 MARCH9Q86YJ5 346 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 SYT12Q8IV01 421 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 PXYLP1Q8TE99 480 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 UCN3Q969E3 161 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 IMP4Q96G21 291 aaKnown RBP13.75□□□□□ -0.21
CDT1-201ENST00000301019 BOCQ9BWV1 1114 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 KLHL1Q9NR64 748 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 IL20RAQ9UHF4 553 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 TLR4O00206 839 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 SLC43A1O75387 559 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 HPXP02790 462 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 ATXN1LP0C7T5 689 aaKnown RBP13.75□□□□□ -0.21
CDT1-201ENST00000301019 SIM1P81133 766 aaPredicted RBP13.75□□□□□ -0.21
CDT1-201ENST00000301019 BOP1Q14137 746 aaKnown RBP13.75□□□□□ -0.21
CDT1-201ENST00000301019 ZNF235Q14590 738 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 SCN4BQ8IWT1 228 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 GPALPP1Q8IXQ4 340 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 CD200R1Q8TD46 325 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 GIMAP1Q8WWP7 306 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 DMRTA2Q96SC8 542 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 GABARAPL1Q9H0R8 117 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 CKAP5Q14008 2032 aa13.75□□□□□ -0.21
CDT1-201ENST00000301019 SYNDIG1LA6NDD5 238 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 PRAMEF25A6NGN4 478 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 MROH6A6NGR9 719 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 SGCEO43556 437 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 C22orf31O95567 290 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 F8A1P23610 371 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 RENBPP51606 427 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 ZNF91Q05481 1191 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 SLC27A1Q6PCB7 646 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 LYPD4Q6UWN0 246 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 LRRTM4Q86VH4 590 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 LIX1LQ8IVB5 337 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 NTAN1Q96AB6 310 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 TBX5Q99593 518 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 PAAF1Q9BRP4 392 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 DPH7Q9BTV6 452 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms