RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 UMODL1-AS1Q8N2C9 162 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 DENND6BQ8NEG7 585 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 CIDECQ96AQ7 238 aaPredicted RBP15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 SH2B3Q9UQQ2 575 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 WNT6Q9Y6F9 365 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 GRXCR1A8MXD5 290 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 MRPS14O60783 128 aaKnown RBP15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 UQCRC2P22695 453 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 GADD45AP24522 165 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 CRISP1P54107 249 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 TAGLNQ01995 201 aaKnown RBP15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 TMEM115Q12893 351 aaPredicted RBP15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 CAMKVQ8NCB2 501 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 GATAD2BQ8WXI9 593 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 ZNF700Q9H0M5 742 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 PCDHB14Q9Y5E9 798 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 GLTPD2A6NH11 291 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 IL3P08700 152 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 CBLP22681 906 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 CA5AP35218 305 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 HNF1BP35680 557 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 TAS2R43P59537 309 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 TCEAL6Q6IPX3 200 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 DGLUCYQ7Z3D6 616 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 NPLOC4Q8TAT6 608 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 GNPDA2Q8TDQ7 276 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 BRI3BPQ8WY22 251 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 GTF2H4Q92759 462 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 TCEAL3Q969E4 200 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 ZNF471Q9BX82 626 aaPredicted RBP15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 SMG9Q9H0W8 520 aaKnown RBP15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 EVA1BQ9NVM1 165 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 NDRG2Q9UN36 371 aaKnown RBP15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 OARD1Q9Y530 152 aa15.8■□□□□ 0.12
SH3RF1-201ENST00000284637 ANKRD12Q6UB98 2062 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 PIK3C2AO00443 1686 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 ZCWPW2A0A1B0GU75 182 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 EIF1AYO14602 144 aaKnown RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 IFNA21P01568 189 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 ACRP10323 421 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 HTR6P50406 440 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 RPS26P62854 115 aaKnown RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 COQ5Q5HYK3 327 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 ISCA2Q86U28 154 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 DGAT2Q96PD7 388 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 ARL6Q9H0F7 186 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 PCDHGB5Q9Y5G0 923 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 MAGED1Q9Y5V3 778 aaPredicted RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 GGT1P19440 569 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 ALDH3B2P48448 385 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 SLC11A1P49279 550 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 E2F1Q01094 437 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 PNLDC1Q8NA58 520 aaKnown RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 OR8J1Q8NGP2 316 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 ZNF821O75541 412 aaPredicted RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 FDXRP22570 491 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 EDNRBP24530 442 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 SLC6A6P31641 620 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 RNF144AP50876 292 aaPredicted RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 MAD2L1BPQ15013 274 aaPredicted RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 C18orf21Q32NC0 220 aaPredicted RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 TSPYL5Q86VY4 417 aaPredicted RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 ZNF527Q8NB42 609 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 OR6C4Q8NGE1 309 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 NAA50Q9GZZ1 169 aaKnown RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 Q9N2J8 555 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 GSKIPQ9P0R6 139 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 PCDHB11Q9Y5F2 797 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 B4GALT2O60909 372 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 AOC2O75106 756 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 PRSS56P0CW18 603 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 FXYD6P3P58550 94 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 GRIK2Q13002 908 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 LIPJQ5W064 366 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 FANK1Q8TC84 345 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 OTUB2Q96DC9 234 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 NXPE2Q96DL1 559 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 COQ10AQ96MF6 247 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 ZNF350Q9GZX5 532 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 SIAEQ9HAT2 523 aa15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 URB1O60287 2271 aaKnown RBP15.79■□□□□ 0.12
SH3RF1-201ENST00000284637 CD8B2A6NJW9 211 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 GJB5O95377 273 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 VNN2O95498 520 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 CD8BP10966 210 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 HSD11B1P28845 292 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 ADH7P40394 386 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 MAPK14Q16539 360 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 AMZ1Q400G9 498 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 PLEKHS1Q5SXH7 462 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 CEACAM19Q7Z692 300 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 TSPAN33Q86UF1 283 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 DCUN1D3Q8IWE4 304 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 ACSL6Q9UKU0 697 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 SARDHQ9UL12 918 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 E7EQ34 232 aa15.78■□□□□ 0.12
SH3RF1-201ENST00000284637 FAAHO00519 579 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms