RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 ALDH3A2P51648 485 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 HNRNPKP61978 463 aaKnown RBP eCLIP8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 SHC2P98077 582 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 ZNF630Q2M218 657 aaPredicted RBP8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 CCDC157Q569K6 752 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 FRMPD2BQ6IN97 320 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 REEP3Q6NUK4 255 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 TBPL2Q6SJ96 375 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 RRM2BQ7LG56 351 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 C8orf59Q8N0T1 100 aaPredicted RBP8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 OR5K1Q8NHB7 308 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 GATA6Q92908 595 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 TMEM19Q96HH6 336 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 ZNF597Q96LX8 424 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 OR51I1Q9H343 314 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 ANKHQ9HCJ1 492 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 TMCC3Q9ULS5 477 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 EXO1Q9UQ84 846 aaKnown RBP8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 ERVK-11Q9UQG0 969 aa8.25□□□□□ -1.09
CALCOCO2-201ENST00000258947 A0A0C4DFX4 3053 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 SCN2AQ99250 2005 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 TRBV5-3A0A0A0MS03 114 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 A0A1W2PR48 441 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 PLOD2O00469 737 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 CTSVO60911 334 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 LDB3O75112 727 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 SERPINB7O75635 380 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 IFNW1P05000 195 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 IFNA16P05015 189 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 ERGP11308 486 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 TNNI3P19429 210 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 IDH2P48735 452 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 VLDLRP98155 873 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 SLC13A2Q13183 592 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 NEDD8Q15843 81 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 TTC23Q5W5X9 447 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 EIF3MQ7L2H7 374 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 NRROSQ86YC3 692 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 PTOV1Q86YD1 416 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 ARMC8Q8IUR7 673 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 PRSS58Q8IYP2 241 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 SYNPOQ8N3V7 929 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 HORMAD2Q8N7B1 307 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 PACRGLQ8N7B6 248 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 AVL9Q8NBF6 648 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 DOHHQ9BU89 302 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 MENTQ9BUN1 341 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 TOR3AQ9H497 397 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 GLIPR2Q9H4G4 154 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 CXorf56Q9H5V9 222 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 THUMPD1Q9NXG2 353 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 WARS2Q9UGM6 360 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 ASXL3Q9C0F0 2248 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 A0A0J9YY10 115 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 NPIPB8E9PQR5 432 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 SGK494L7N484 410 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 B4GALT2O60909 372 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 UBXN7O94888 489 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 PROS1P07225 676 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 PTPN6P29350 595 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 MLLT3P42568 568 aaPredicted RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 RNF144AP50876 292 aaPredicted RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 RACK1P63244 317 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 STX4Q12846 297 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 ANKRD34AQ69YU3 496 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 MARVELD2Q8N4S9 558 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 BPIFB6Q8NFQ5 453 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.24□□□□□ -1.091e-323■■■■■ 27.4
CALCOCO2-201ENST00000258947 CREB3L4Q8TEY5 395 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 GAL3ST3Q96A11 431 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 MUS81Q96NY9 551 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 OR2A14Q96R47 310 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 SLAMF7Q9NQ25 335 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 RASSF1Q9NS23 344 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 MUTYHQ9UIF7 546 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 TTC28Q96AY4 2481 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 COL4A3Q01955 1670 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 CPED1A4D0V7 1026 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 METTL12A8MUP2 240 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 DENRO43583 198 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 NOL3O60936 208 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 MITFO75030 526 aaPredicted RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 HMGN2P05204 90 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 HOXC4P09017 264 aaPredicted RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 ITGA2P17301 1181 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 IFNA8P32881 189 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 DCTP40126 519 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 VEZF1Q14119 521 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 LTB4RQ15722 352 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 MPEG1Q2M385 716 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 WDR45BQ5MNZ6 344 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 NKAIN2Q5VXU1 208 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 SATL1Q86VE3 508 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 SVOPLQ8N434 492 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 NATD1Q8N6N6 113 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 OR4K14Q8NGD5 310 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 OR5T3Q8NGG3 340 aa8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 GTPBP3Q969Y2 492 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 NMD3Q96D46 503 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-201ENST00000258947 FCRL1Q96LA6 429 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms