RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 TIA1P31483 386 aaKnown RBP eCLIP13.47□□□□□ -0.258e-6■□□□□ 9.8
SUPT4H1-201ENST00000225504 BUD31P41223 144 aaPredicted RBP13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 SLC26A5P58743 744 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 TAS2R50P59544 299 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 IGLV3-21P80748 117 aaPredicted RBP13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 MYBPC3Q14896 1274 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 PRSS53Q2L4Q9 553 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 BTBD16Q32M84 506 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 SPIN4Q56A73 249 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 PLAG1Q6DJT9 500 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 NOXRED1Q6NXP6 359 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 RNF165Q6ZSG1 346 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 KIF2BQ8N4N8 673 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 PTPMT1Q8WUK0 201 aaPredicted RBP13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 SLC39A7Q92504 469 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 ZNF75CPQ92670 426 aaPredicted RBP13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 LPAR4Q99677 370 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 LRTM1Q9HBL6 345 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 C1orf109Q9NX04 203 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 GPR83Q9NYM4 423 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 VTI1BQ9UEU0 232 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 CES1P1Q9UKY3 287 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 DLGAP4Q9Y2H0 992 aa13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 POLR3HQ9Y535 204 aaPredicted RBP13.47□□□□□ -0.25
SUPT4H1-201ENST00000225504 BOD1L1Q8NFC6 3051 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 NPIPB8E9PQR5 432 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 LSM1O15116 133 aaKnown RBP13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 PEX11AO75192 247 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 SNNO75324 88 aaPredicted RBP13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 MYO1DO94832 1006 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 GPR75O95800 540 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 IL3P08700 152 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 PRPH2P23942 346 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 TACR1P25103 407 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 RPL14P50914 215 aaKnown RBP13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 GPR143P51810 404 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 PPP2R2AP63151 447 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 NR6A1Q15406 480 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 XKR7Q5GH72 579 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 COLEC12Q5KU26 742 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 B3GNTL1Q67FW5 361 aaPredicted RBP13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 FCRLBQ6BAA4 426 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 FAM180BQ6P0A1 224 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 SIRT6Q8N6T7 355 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 ZNF321PQ8N8H1 164 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 C9orf43Q8TAL5 461 aaPredicted RBP13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 BRIX1Q8TDN6 353 aaKnown RBP13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 EGLN2Q96KS0 407 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 PPP1R36Q96LQ0 422 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 LHPPQ9H008 270 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 HAO1Q9UJM8 370 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 TUBD1Q9UJT1 453 aa13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 EXO1Q9UQ84 846 aaKnown RBP13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 PCDHGA9Q9Y5G4 932 aaKnown RBP13.46□□□□□ -0.25
SUPT4H1-201ENST00000225504 BLACEA4D250 179 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 SAGE2PA6NJ88 616 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 TNNI3P19429 210 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 ALDH9A1P49189 494 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 TRA2BP62995 288 aaKnown RBP13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 DUSP2Q05923 314 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 PDCD2Q16342 344 aaPredicted RBP13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 GALNTL6Q49A17 601 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 TCTN3Q6NUS6 607 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 M1APQ8TC57 530 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 SMAD5Q99717 465 aaKnown RBP13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 SLC25A18Q9H1K4 315 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 WDR41Q9HAD4 459 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 THAP1Q9NVV9 213 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 PTGFRNQ9P2B2 879 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 BAIAP2L1Q9UHR4 511 aa13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 ZNF223Q9UK11 482 aaPredicted RBP13.45□□□□□ -0.26
SUPT4H1-201ENST00000225504 C1orf226A1L170 272 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 A8MUI8 341 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 HRKO00198 91 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 MAN1A2O60476 641 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 GUCY1B2O75343 617 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 ICAM2P13598 275 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 PTGER1P34995 402 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 STT3AP46977 705 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 CD97P48960 835 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 XKP51811 444 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 PGDP52209 483 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 OCRLQ01968 901 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 C2orf80Q0P641 193 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 SERTAD2Q14140 314 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 C6orf136Q5SQH8 315 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 OR52E8Q6IFG1 317 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 SLC48A1Q6P1K1 146 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 LINC00696Q6ZRV3 163 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 ASB18Q6ZVZ8 466 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 PTRH1Q86Y79 214 aaKnown RBP13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 APCDD1LQ8NCL9 501 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 LSM14AQ8ND56 463 aaKnown RBP13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 OR4K14Q8NGD5 310 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 CDC26Q8NHZ8 85 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 ELP5Q8TE02 316 aa13.44□□□□□ -0.26
SUPT4H1-201ENST00000225504 FCRL1Q96LA6 429 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms