RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ZNF514Q96K75 400 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 HSPA12BQ96MM6 686 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 CDCA3Q99618 268 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SLC12A9Q9BXP2 914 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 MS4A12Q9NXJ0 267 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 GSTK1Q9Y2Q3 226 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 FZD6O60353 706 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 ATE1O95260 518 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 CTBSQ01459 385 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF155Q12901 538 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 HSDL2Q6YN16 418 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 DGLUCYQ7Z3D6 616 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SLC44A3Q8N4M1 653 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF433Q8N7K0 673 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 OR2M4Q96R27 311 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SPATA5L1Q9BVQ7 753 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 IKZF5Q9H5V7 419 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 FGF22Q9HCT0 170 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SPATA6Q9NWH7 488 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 THAP10Q9P2Z0 257 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 MAPRE3Q9UPY8 281 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 COL4A6Q14031 1691 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 TMX2-CTNND1H3BSU7 103 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 TAF4O00268 1085 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF821O75541 412 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SLC35G6P0C7Q6 338 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 PTX3P26022 381 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SLC13A2Q13183 592 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SLC36A3Q495N2 470 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 FAM83HQ6ZRV2 1179 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 IL17RCQ8NAC3 791 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 OR10H4Q8NGA5 316 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SMPDL3AQ92484 453 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 Q96MT0 163 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF583Q96ND8 569 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 APOOQ9BUR5 198 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 ANKRD60Q9BZ19 345 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 C6orf106Q9H6K1 298 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 TAS2R9Q9NYW1 312 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SPATA7Q9P0W8 599 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 CAB39Q9Y376 341 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 COLEC10Q9Y6Z7 277 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 GREB1Q4ZG55 1949 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 CKAP5Q14008 2032 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 MYO16Q9Y6X6 1858 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 RHPN2P1A8MT19 583 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 FAM227AF5H4B4 570 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 TAPBPO15533 448 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 GREM1O60565 184 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 ATP6V1G1O75348 118 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 IL1RNP18510 177 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 CBLP22681 906 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 CMPK1P30085 196 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 TOR1AIP1Q5JTV8 583 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 HACD2Q6Y1H2 254 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 CHMP1BQ7LBR1 199 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF438Q7Z4V0 828 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 FGD2Q7Z6J4 655 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 OR5D16Q8NGK9 328 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 MRGPRX3Q96LB0 322 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 NECTIN4Q96NY8 510 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 GAL3ST4Q96RP7 486 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 ARMC1Q9NVT9 282 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 PTBP2Q9UKA9 531 aaKnown RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 VWA8A3KMH1 1905 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 GABRR3A8MPY1 467 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 BTN3A3O00478 584 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 OR5F1O95221 314 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 BMP10O95393 424 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 H1F0P07305 194 aaKnown RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 RUNDC3AQ59EK9 446 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 RBM48Q5RL73 367 aaKnown RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 FAM92BQ6ZTR7 304 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 DCUN1D3Q8IWE4 304 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 CHERPQ8IWX8 916 aaKnown RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 FAM98AQ8NCA5 519 aaKnown RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 ZFAND2BQ8WV99 257 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 RPL3LQ92901 407 aaKnown RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 MAELQ96JY0 434 aaKnown RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 ABCG4Q9H172 646 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 EHD1Q9H4M9 534 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 TM9SF3Q9HD45 589 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 C8orf4Q9NR00 106 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 OLAHQ9NV23 265 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 APOBEC3BQ9UH17 382 aaKnown RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 TMA7Q9Y2S6 64 aaKnown RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 PCDHB11Q9Y5F2 797 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 IQCMA0A1B0GVH7 501 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 J3KTA2 159 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 HOXC11O43248 304 aaPredicted RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 B4GALT2O60909 372 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 ANXA8P13928 327 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 NDUFV2P19404 249 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 C21orf33P30042 268 aaPredicted RBP11.5□□□□□ -0.57
CHPF2-201ENST00000035307 NPRL3Q12980 569 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 HLA-DQA1Q5Y7H0 255 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 ATG9BQ674R7 924 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 IZUMO1Q8IYV9 350 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 TSPEARQ8WU66 669 aa11.5□□□□□ -0.57
CHPF2-201ENST00000035307 RGMAQ96B86 450 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 294.2 ms