RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Samd4aQ8CBY1 711 aaKnown RBP21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Dnajc27Q8CFP6 273 aa21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Tp53bp2Q8CG79 1128 aa21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Gpn2Q8VEJ1 310 aa21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Chid1Q922Q9 393 aa21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Ssr2Q9CPW5 183 aa21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Nudt21Q9CQF3 227 aaKnown RBP21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Ttc25Q9D4B2 624 aa21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Nacc2Q9DCM7 586 aa21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Kat2aQ9JHD2 830 aa21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 SrfQ9JM73 504 aa21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Rad18Q9QXK2 509 aaKnown RBP21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Acot2Q9QYR9 453 aa21.53■■□□□ 1.04
Scn1b-201ENSMUST00000098548 A0A1L1ST33 502 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Ssxa1B1AUS7 101 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Crisp4E9PVG4 293 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Gm11168J3QN50 228 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Klf10O89091 479 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Timp1P12032 205 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 PthlhP22858 175 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Slc6a12P31651 614 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Cct8P42932 548 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Rph3aP47708 681 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Fgf1P61148 155 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 IgfalsP70389 603 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 MogQ61885 246 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Elfn2Q68FM6 823 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 GnptgQ6S5C2 307 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Gpr75Q6X632 540 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Kif26bQ7TNC6 2112 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 IfneQ80ZF2 192 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Slc39a9Q8BFU1 308 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Ugt2b35Q8BJL9 529 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Cpsf4Q8BQZ5 211 aaKnown RBP21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Vmn1r219Q8R271 312 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 CutalQ9D1U5 156 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 MispQ9D279 648 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Ribc2Q9D4Q1 309 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Usp12Q9D9M2 370 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 ErmapQ9JLN5 566 aa21.52■■□□□ 1.04
Scn1b-201ENSMUST00000098548 Zfp600A2A7V0 737 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Trmt1lA2RSY6 728 aaKnown RBP21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Erich2E9Q1A6 463 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Herc6F2Z461 1003 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ckmt1P30275 418 aaKnown RBP21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Pdcd5P56812 126 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Crisp1Q03401 244 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Trim75Q3UWZ0 467 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Trim67Q505D9 768 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Cr1lQ64735 483 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Poglut1Q8BYB9 392 aaKnown RBP21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Q91W34 466 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Mcm8Q9CWV1 833 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Apbb2Q9DBR4 760 aa21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 VarsQ9Z1Q9 1263 aaKnown RBP21.51■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Olfr738L7N1X7 311 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ephb6O08644 1014 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Hax1O35387 280 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 HbaP01942 142 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Cntn1P12960 1020 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 H2-Q6P79568 326 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Hdgfl2Q3UMU9 669 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Cldn34b4Q3V0X2 211 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Pdp2Q504M2 532 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Snx6Q6P8X1 406 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Cyp20a1Q8BKE6 462 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Yipf4Q8C407 246 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Olfr1278Q8VF39 313 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 ScgnQ91WD9 276 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Cops7aQ9CZ04 275 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Tmem30cQ9D4D7 342 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Lpcat2bQ9D5U0 516 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Erp27Q9D8U3 272 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Prl8a1Q9DAV8 240 aa21.5■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Speer4cG3UXD1 256 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Gm10354K7N6A0 256 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Nrp2O35375 931 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 GypaP14220 168 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Zp2P20239 713 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Lbx1P52955 282 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Tsc22d1P62500 1077 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 OxtrP97926 388 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Dusp5Q1HL35 384 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Srsf6Q3TWW8 339 aaKnown RBP21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 NkaplQ5SZT7 395 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 MuskQ61006 868 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Adamts16Q69Z28 1222 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Pex11gQ6P6M5 241 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Plekha6Q7TQG1 1173 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Olfr1045Q7TR80 315 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 LssQ8BLN5 733 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Fam92aQ8BP22 355 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ikzf5Q8BU00 419 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Gykl1Q8C635 549 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ifnl3Q8CGK6 193 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Mcoln3Q8R4F0 553 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 HpgdQ8VCC1 269 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Noxo1Q8VCM2 349 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Slc35c2Q8VCX2 364 aa21.49■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Olfr77Q8VEY9 312 aa21.49■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms