RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Xlr3aQ60595 226 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Defa17Q64016 82 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Dnajc8Q6NZB0 253 aaKnown RBP9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 CebpeQ6PZD9 281 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rmnd5aQ80YQ8 391 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Pex26Q8BGI5 305 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Csgalnact1Q8BJQ9 530 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cyp20a1Q8BKE6 462 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Pithd1Q8BWR2 211 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Wwp1Q8BZZ3 918 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cdkl1Q8CEQ0 352 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 CcsapQ8QZT2 252 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Syngr3Q8R191 229 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rnf111Q99ML9 989 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ppa1Q9D819 289 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Bmp10Q9R229 421 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Lhx9Q9WUH2 397 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gdf2Q9WV56 428 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ca14Q9WVT6 337 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ranbp2Q9ERU9 3053 aaKnown RBP9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cisd3B1AR13 137 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Fkbp8O35465 402 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Phox2bO35690 314 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Grpel2O88396 224 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 InvsO89019 1062 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Casp8O89110 480 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 BdnfP21237 249 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 AdslP54822 484 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Slc37a3Q3TIT8 494 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ankrd37Q569N2 159 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Dag1Q62165 893 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Znf629Q6A085 867 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Otub1Q7TQI3 271 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tex13c3Q810P0 219 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 LssQ8BLN5 733 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ythdf3Q8BYK6 585 aaKnown RBP9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ttc23Q8CHY7 488 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Crb3Q8QZT4 113 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cdt1Q8R4E9 557 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr97Q8VFE1 310 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr1378Q8VGH0 315 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr1390Q8VGW9 311 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rnh1Q91VI7 456 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Acsl6Q91WC3 697 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Egln2Q91YE2 419 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 D730048I06RikQ9CQB8 106 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 OoepQ9CWE6 164 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Xylt2Q9EPL0 865 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 KelQ9EQF2 713 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Panx1Q9JIP4 426 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Opn4Q9QXZ9 521 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Lrp4Q8VI56 1905 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rhox1B1APN4 224 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr310B2RVZ1 332 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr652B9EHE6 318 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ptrhd1D3Z4S3 140 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Catsperg1E9Q355 1151 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 HgdO09173 445 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Zp1Q62005 623 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cpa1Q7TPZ8 419 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Slc25a40Q8BGP6 337 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 NapepldQ8BH82 396 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Lrfn3Q8BLY3 626 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Znf451Q8C0P7 1056 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Stx18Q8VDS8 334 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Msh4Q99MT2 958 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Prl7c1Q9CRB5 251 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ptdss2Q9Z1X2 473 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gm11983V9GXS8 105 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 AcacaQ5SWU9 2345 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr1089A0A1L1SRK6 311 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 EXOC1LB9EK06 172 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 5430403G16RikD3Z5L4 667 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Coq10aE9Q3H6 259 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Inpp5aE9QAS7 422 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gm8922F6XVS9 199 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Vmn2r92L7N2A4 860 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Vmn2r52L7N2B2 852 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 PlauP06869 433 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 PdxpP60487 292 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 AdmP97297 184 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Lrrc58Q3UGP9 366 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Taar2Q5QD17 339 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Grm7Q68ED2 915 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Mup21Q80YX8 181 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Slc46a2Q8CA03 479 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr449Q8VGW8 311 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Vmn1r85Q8VIB8 308 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Nck1Q99M51 377 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Spata1Q9D5R4 444 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Vmn1r52Q9EP79 309 aa9.4□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr59B1ARL3 323 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Klhl4B1AZR0 717 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tmed7D3YZZ5 224 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lipo4D3Z608 396 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Krt90E9Q1Z0 538 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Herc6F2Z461 1003 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp619G3X9T2 1161 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 1700017D01RikG5E851 209 aa9.4□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Nipsnap2O55126 281 aa9.4□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms