RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Ppp2r2dQ925E7 453 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Clec3aQ9EPW4 196 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tspan6O70401 245 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cd2P08920 344 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ifngr1P15261 477 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Eml1Q05BC3 814 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rnf43Q5NCP0 784 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr814Q7TRH4 310 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Kctd13Q8BGV7 329 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 VillQ91YD6 859 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Eef1e1Q9D1M4 174 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Txnrd2Q9JLT4 524 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Clcf1Q9QZM3 225 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tyk2Q9R117 1184 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gpr155A2AWR3 868 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr727A2RTN7 324 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ercc1P07903 298 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rpl10lP86048 214 aaKnown RBP11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Lmf1Q3U3R4 574 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Mccc2Q3ULD5 563 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ube2j2Q6P073 259 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tas2r117Q7M715 330 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1080Q7TR67 313 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zcchc10Q9CX48 178 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gtpbp8Q9CY28 285 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Scamp5Q9JKD3 235 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 A0A1L1SV24 88 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Mtnd5P03921 607 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 St3gal1P54751 337 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Eef2kmtQ3UZW7 335 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fzd3Q61086 666 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gata6Q61169 589 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr1100Q8VFM1 321 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm4924A0A1B0GR71 966 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Msx1P13297 303 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slc1a5P51912 553 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 TstP52196 297 aaKnown RBP11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fmo5P97872 533 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fpr-rs6Q3SXG2 339 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zfp872Q3UVL3 465 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 HykkQ5U5V2 376 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 CstbQ62426 98 aaKnown RBP11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zfp790Q80ZX2 779 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Lrch3Q8BVU0 778 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zcchc9Q8R1J3 271 aaKnown RBP11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rdh10Q8VCH7 341 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pcdhga12Q91XY7 932 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cyp4f15Q99N18 534 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fundc2Q9D6K8 151 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rcan2Q9JHG2 197 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 DccP70211 1447 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ccdc74aE9Q9U8 364 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pramel5Q7TPY4 500 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Bclaf1Q8K019 919 aaKnown RBP11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rbm12Q8R4X3 992 aaKnown RBP11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Pcbd2Q9CZL5 136 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slco6d1Q9D5W6 683 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Nqo2Q9JI75 231 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Scn2aA0A0J9YTW6 2006 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm3327F7C9A1 213 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Gm21833J3QPK1 500 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cdh11P55288 796 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rps13P62301 151 aaKnown RBP11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rhox4fQ2MDF8 205 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rhox4cQ2MDG1 205 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Q6P2K3 674 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slfn5Q8CBA2 884 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Rhox4aQ9D3I8 205 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zfp963D3Z2T8 383 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cilp2D3Z7H8 1162 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Spp2Q8K1I3 203 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 TesclQ9DAJ7 231 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr675A0A1B0GSE1 317 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr619E9PV95 320 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Vmn1r12G5E8G1 307 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Hbb-bh0P04443 147 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Stfa2P35174 103 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tle3Q08122 772 aaKnown RBP11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Psg29Q3URN6 468 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Sez6l2Q4V9Z5 910 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Epha6Q62413 1035 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 GkQ64516 559 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ttyh3Q6P5F7 524 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Ubap2lQ80X50 1107 aaKnown RBP11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Zc3hc1Q80YV2 501 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Emc1Q8C7X2 997 aaKnown RBP11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr120Q8VFQ2 330 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Olfr686Q8VGX3 317 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Camk1gQ91VB2 477 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 CsprsQ99388 208 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Moap1Q9ERH6 352 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tgm7A2ART8 616 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Creb1Q01147 341 aaKnown RBP11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Adh7Q64437 374 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Stoml3Q6PE84 287 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Tspan18Q80WR1 248 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Acat3Q80X81 397 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slc35f1Q8BGK5 408 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Nipal3Q8BGN5 410 aa11.51□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slc7a4Q8BLQ7 635 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 71.4 ms